| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2242 |
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| Symbol | |
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| ID | 3909025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2570503 |
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| End bp | 2572659 |
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| Gene Length | 2157 bp |
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| Protein Length | 718 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637884137 |
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| Product | ABC transporter related |
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| Protein accession | YP_485858 |
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| Protein GI | 86749362 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR03375] type I secretion system ATPase, LssB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.960631 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGCCTC CGAGTGCGCC GGCGCCGCAC CCGGACCCGT TGAGTGACAG TCTGCTGTAT
CTCGCCGCGC ATCACGGCCG CGCGCTCAGC CGAAGCGCGC TGTTGTCCGG CCTGCCGCTC
GAACGCGGCG TCCTCACTGT CGGGCTCTAC GAGCGCGCGG CGCAGCGAGC CGGACTCGAG
GCCCAGCTCG AAGAGCGTCC GCTGCACGAC ATTCCGGCGC TGGTGCTGCC CTGCGTGCTG
ATGCTGCACG ACGGCTCGAC CCGGATTCTG CTGAGCATCG ACGACGCCGG GCGTCTGGTC
GTGGTCGACC CCTCGCGCGG CGATGCCGAG GCTGCCGAGC GCCTCGATGC GGTCGCCGCG
CAATATTCCG GCTTCGCGTA TTTCGTGCGG CCGGCGACCG TGGCCGATCC GCGCGCGGTG
GCGAGCGGCG ATCTGCCGAA GTCGCATTGG TTCTGGTCGG TCGTCAGCCG GTTCGGCGCC
AACTACGCCC ATGTCGCGAT CGCCGCCTTC ATCGTCAACA TTCTGGCGCT GGCGGCGCCG
CTGTTCACGA TGAGCGTGTA CGACCGGGTG ATCCCGAACG GCGCGATCCC GTCGCTGGTC
GCGCTAGGCA TCGGGCTCGC CCTCGCGATC GCATTCGACT TCCTGCTCAA GGTGGTGCGC
AGCCGCATCA TCGACATGAC CGGCAAGAAG GTCGACGTGG TTCTGGCGGC GCGGATCTTC
GAGCACGTGA TGGCGCTGAA GATGGATAAG CGGCCGCCCT CGGTCGGCAT CCTCGCCAAC
CAGATGCGCG ACTTCGATTC GGTGCGCGAG TTCTTCACAT CCGGCACCGT GGTGTCCGCC
ACCGACATGC TGTTCGCGAT CCTGTTCATC GCGGTGCTGT TCATGATCGC CGGACCGCTC
GGCTGGATTC CGCTGGCGAT GCTGCCGGTG ATGATCATCA TCGGATTGCT GATCCAGCGC
CCGCTGGATC GTGCGATGCG GCGGATGCAG GCGGAGTCGG CGGCGCGCCA CGGCATTCTG
GTCGAGTCGC TGAACGGCAT CGAGACCGTG CGTGCGGTGG CCGGTGAGGG ACGGGTGCAG
ACGGTTTGGG AACGTTCGGT CGCGGCGACC GCGCGTTCGA GCGAGGACGT GCAGTTCTGG
GCGTCGCTGG CGATGACGGC GGCGAGCGTC GCAAGCCAGC TCTGCAGCCT GTTGCTGGTG
GTGGTGGGCG TGTTCCTGAT CCTCGACGGC AAGCTGTCGG TCGGTGCGCT GGTCGCGGCC
AACATGCTGG CCGGCCGTGT GCTCGGTCCG ATCGCGGGAA TCGCCGGGGT GATGACCCGC
GCCACGCAGA CGAGCTCCGC GCTGCGTTCG ATCGACCGGC TGATGTCGCT GGAGCGCGAG
CGGCCGCCCG AGAAGATCTA CGTCGCCCGG GAGATCAAGC AGGGCGCGAT CCAATTCAAG
AACGTCAGCT TCTCGTACCC CAACAGCCAG GCCAAGGCGC TCGACAACGT CTCGTTCCAG
ATCCGGCCGG GCGAGAAGAT CGGCATCATC GGCCGCGTCG GCTCCGGCAA GACCACGGTC
GGTCGGCTCG CGACCGCATT CTATCCGCCG AGCGAAGGCA CCATCCTGAT CGACGGCATC
GACATCCGTC AGTACGACCC GGCCGACCTG CGCGCCGGCA TCGGCTTCGT GCTGCAGGAC
ACCGATCTGT TCTACGGCAA GCTGCGCGAC AACATCACGT TGGGCCGCTC CGGCGCGACC
GACGCGGAAG TGCTCGAAGC CGCCCGGCTG GCCGGCGTCG AGACCTTCAT CGCCGGTCAC
CCGCAGGGTT ACGACATGAT GATCGCCGAG GGCGGCCGTA GCCTGTCCGG TGGCCAAAAG
CAGGCGATCG GTCTGGCGCG GGTGCTGATC CGCAAGCCGC GTGTGTTGTT CCTCGACGAA
CCGACCGCGC ATTTCGACGT CCGAAGCGAA GGCGAATTCC TCGAGCGACT GAAAAAGCTC
GCGCACGGCG AGATGACCAT CATCGTCTCG ACCCATCGGC CGTCACTGCT GTCGCTGGTC
GATCGGATCC TGGTGTTCGA CCAGGGCAAG ATCGTCGCCG ACGGACCGAC CGAGCAGATC
TTGACGAAGC TGCGTCCGCA ACCGGCCGCG GCTCCGGCCG CTGCCGGGCG AATCTGA
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| Protein sequence | MTPPSAPAPH PDPLSDSLLY LAAHHGRALS RSALLSGLPL ERGVLTVGLY ERAAQRAGLE
AQLEERPLHD IPALVLPCVL MLHDGSTRIL LSIDDAGRLV VVDPSRGDAE AAERLDAVAA
QYSGFAYFVR PATVADPRAV ASGDLPKSHW FWSVVSRFGA NYAHVAIAAF IVNILALAAP
LFTMSVYDRV IPNGAIPSLV ALGIGLALAI AFDFLLKVVR SRIIDMTGKK VDVVLAARIF
EHVMALKMDK RPPSVGILAN QMRDFDSVRE FFTSGTVVSA TDMLFAILFI AVLFMIAGPL
GWIPLAMLPV MIIIGLLIQR PLDRAMRRMQ AESAARHGIL VESLNGIETV RAVAGEGRVQ
TVWERSVAAT ARSSEDVQFW ASLAMTAASV ASQLCSLLLV VVGVFLILDG KLSVGALVAA
NMLAGRVLGP IAGIAGVMTR ATQTSSALRS IDRLMSLERE RPPEKIYVAR EIKQGAIQFK
NVSFSYPNSQ AKALDNVSFQ IRPGEKIGII GRVGSGKTTV GRLATAFYPP SEGTILIDGI
DIRQYDPADL RAGIGFVLQD TDLFYGKLRD NITLGRSGAT DAEVLEAARL AGVETFIAGH
PQGYDMMIAE GGRSLSGGQK QAIGLARVLI RKPRVLFLDE PTAHFDVRSE GEFLERLKKL
AHGEMTIIVS THRPSLLSLV DRILVFDQGK IVADGPTEQI LTKLRPQPAA APAAAGRI
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