| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2236 |
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| Symbol | |
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| ID | 3909019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 2560189 |
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| End bp | 2561403 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637884131 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_485852 |
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| Protein GI | 86749356 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCACAG TGAAGCGCGT CGCCGTTGCC GGCGCGGTGT TGATTGCATT GATTGCGGGA
TGGCTGATCA AGGACAGGCT GTCTGGGAGG CCTACGGAGA CCCTGACGAC GGCGCCGGTG
CAGATCGCGG ATATCGAAGA CACCGTACTG GCCAGCGGCA CCTTGAAGCC GATCAAGATG
GTGGCGGTCG GCGCGCAGGT CTCCGGTCGA GTCACATCGC TCAAGGTCCG GGTCGGCGAC
AGGGTCAGGC TCGGCGACCA GATCGCGCAG ATCGATCCTG TCACCAAGCA GAACGATCTG
CGCACGGCGG AAGCGGCGCT GCAGAACATG CGCGCGCAGC GCGCCGAGAA GGAAGCGACG
CTGGCGCTGG CAGAGGCCTC GCTGGCGCGG CACAACGTCA CCTTCGCCCA GAAGGCGACC
TCGCGCGCCG ACTTCGAGAG CGCGGAAGCG ACCGTGAAAC AAACCCGCGC GCAGATCGCG
GCGCTCGACG CACAGATCAC GGAATCGATC GTGTCGGTCG AGAACGCACG CGTCAATCTC
GACTACACCA GGATCATCGC GCCGATCGAC GGCACCGTGC TCGCCGTCGT CACCCAGGAA
GGCCAGACCG TCAATGCGGT CCAATCGGCG CCGACCATCG TGATCCTCGG TGAGGTCGGG
ACGATGACGA TCCGCGCGGA GATTTCCGAA GTCGACGTGA TCAAGATCAG GCCCGGCCAG
GACGTCTATT TCAACATCCT CGGCGACCCC GACCATCGCT ACGATGCGCG GCTCGATTTC
ATCGAGCCCG CACCGGAATC GATCAAGAAC GACAGCAGCT TCAGTTCGAC CAGCACGACG
TCGAGCAGTT CATCGTCCTC GAGCAGTTCG ACCTCAGCGA TCTACTACAA CGGCATCTTC
AGCGCGCCCA ATCCGGACGG CCTGCTGCGC ACCTACATGA CCGCGGAAGT CCATATCGTC
GTGGCGCAGG CGAAAGGCGT GATGACGATC CCGTCGGCGG CGCTGACCCA GCGCAACCCG
GACGGCAGCT ATCAGGTCGA GGTCAAAGAC GCCGCCGGCG CCGCAGCGAC GCGCGCGATC
CGGATCGGCA TCAACAACAA GCTGACGGCC GAGGTCCGCT CCGGCCTCTC GGTGGGCGAG
GACGTCGTGG TGCGCAAGGC CGCGCCCGAA ACGAAGCAAT CGTCGGGTCC CCCCGGCCCG
CCGCCCGGAA TGTGA
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| Protein sequence | MFTVKRVAVA GAVLIALIAG WLIKDRLSGR PTETLTTAPV QIADIEDTVL ASGTLKPIKM
VAVGAQVSGR VTSLKVRVGD RVRLGDQIAQ IDPVTKQNDL RTAEAALQNM RAQRAEKEAT
LALAEASLAR HNVTFAQKAT SRADFESAEA TVKQTRAQIA ALDAQITESI VSVENARVNL
DYTRIIAPID GTVLAVVTQE GQTVNAVQSA PTIVILGEVG TMTIRAEISE VDVIKIRPGQ
DVYFNILGDP DHRYDARLDF IEPAPESIKN DSSFSSTSTT SSSSSSSSSS TSAIYYNGIF
SAPNPDGLLR TYMTAEVHIV VAQAKGVMTI PSAALTQRNP DGSYQVEVKD AAGAAATRAI
RIGINNKLTA EVRSGLSVGE DVVVRKAAPE TKQSSGPPGP PPGM
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