| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2235 |
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| Symbol | |
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| ID | 3909018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 2558221 |
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| End bp | 2560185 |
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| Gene Length | 1965 bp |
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| Protein Length | 654 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637884130 |
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| Product | hypothetical protein |
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| Protein accession | YP_485851 |
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| Protein GI | 86749355 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGGTT CGACCATCGA GTTGCGCGGC CTGCGCCGCG AATTCCCTTC CGGCGAGGCG
ACGGTCGTCG CGCTGCAGGA TCTCGATCTC ACGATCGAGC CCGGCGAGAT GGTCGCGATC
ATGGGAGCGT CCGGATCGGG CAAATCGACG CTGATGAACA TCCTCGGATG TCTCGACCGG
CCGACCTCCG GCAGCTACCG GATCGCCGGC CGCGAGACCT CGTCGCTCGA AGCCGACGAA
TTGTCGGCGC TGCGGCGCGA GCATTTCGGC TTCATTTTCC AGCGCTATCA TCTGCTGCCG
GCACTGTCGG CGCTCGGCAA TGTCGAGATC CCGGCGATCT ACGCCGGCCA GCCGGGAGAG
GCGCGACGCG CCCGGGCCGG TGAACTACTG GCGCGGCTCG GCCTCGCCGA CCGCAGCGGC
CATCGCCCCA ATCAACTATC GGGCGGCCAG CAGCAACGGG TGTCGATCGC GCGCGCCTTG
ATGAACGGCG CCGACGTGAT TCTCGCCGAC GAGCCCACCG GCGCGCTCGA CCAGCGCAGC
GGCACCGAGG TGCTGCAGAT CCTCGACGAG CTGAACCGCG ACGGCAAGAC GGTCATCATC
GTCACCCACG ACGCCTCGGT TGCCGCGCGC GCCAAGCGGG TGATCGAACT GCGCGACGGC
GTCGTGGTCG CGGATCGCCT CACCTCGCCC GAAGCGGCCC GCCGCGCCGG CGACGCGCCC
ACCCGACAGC CGCCGGCGAC GCCGCGTTGG AATTGGCGGC GCGAATACGA CCGGATCTCC
GAAGCGACGC GGATCGCCGT GCTGGCGATG GCGGCGCACC GGCTACGCAG CTTCCTCACG
ATGCTGGGCA TCATCATCGG CATCGCGTCG GTGGTGTTCG TCGTCGCCGT CGGCGACGCC
GCCAAACGCA AGGTGCTGGC CGATATCAGC AGCCTCGGCA CCAACACCAT CGAGATCTTT
CCCGGCAAGG ACATGGGCGA CGTCCGCTCC TCGAAGATCA AGACCCTGGT CGCCGCCGAC
GCCCGGGCGC TGGCGCAGCA GCCTTACATC GACGGCGTGA CGCCCACGGT CTCGACCACC
AGCACGCTGC GCTACGGCGG GCTCGAGGCC AACGCCCTCG TCAACGGCGT CGGCGATCAG
TACTTCGACG TCAAGGGCAC CAAGCTCGCC TCTGGCCGAT TCTTCGACGC GAGCGGGCTG
CGTGACATCG TGCAGGACGT CGTGATCGAT GAGAAGACCC GGCAGACATT CTTCGCCGAC
GTGGCCGGCG GCGCCGTCGG CAAGGTGATC CTGATCGGCA AGGTGCCGTG CCGGATCGTC
GGCGTGATGC AGCAGCAGCA AAGCGGCTTC GGCTCCAACC AGAACCTCTC GGTCTACCTG
CCCTACACCA CCGTACAGGC CCGTTTCCTC GGCAATTCGT CGCTGCGCAG CATTCTGCTC
AAGGTCAGCG ATACGGTCGC GACCGCAGAC GCCGAACAGG ACGTCACAAG GTTCCTGACG
CTGCGGCACC GGGTCAAGGA TTTCGTGATT CTGAACACCG ACGACATCCG CAAGACCATC
ACCAGCACCA CGGGCACGCT GACCCTGATG ATCGCCGCCA TCGCGGTGAT CTCGCTCGTG
GTCGGCGGCA TCGGCGTCAT GAACATCATG CTGGTGTCGG TGTCCGAACG GGTCGGCGAG
ATCGGCGTGC GCATGGCGGT CGGCGCGCGG CGCAGCGACA TCCTGCAGCA GTTCCTGATC
GAGGCGGTGG TGGTCTGCCT GATCGGCGGC GGGCTCGGCG TCGGCGTCGC CTTCGGCCTC
GCCGCGCTGT TCAACCTGGT GGTGCCGATG TTTCCGCTCA GCCTGTCCGG CACCTCGATC
GCCGCCGCAT TTGTCTGCTC GACGGGAATC GGCATCGTGT TCGGCTATCT GCCGGCCCGC
CAGGCGTCGT TCCTGGACCC GCTGGCGGCG CTGTCGCGGG ACTAG
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| Protein sequence | MAGSTIELRG LRREFPSGEA TVVALQDLDL TIEPGEMVAI MGASGSGKST LMNILGCLDR
PTSGSYRIAG RETSSLEADE LSALRREHFG FIFQRYHLLP ALSALGNVEI PAIYAGQPGE
ARRARAGELL ARLGLADRSG HRPNQLSGGQ QQRVSIARAL MNGADVILAD EPTGALDQRS
GTEVLQILDE LNRDGKTVII VTHDASVAAR AKRVIELRDG VVVADRLTSP EAARRAGDAP
TRQPPATPRW NWRREYDRIS EATRIAVLAM AAHRLRSFLT MLGIIIGIAS VVFVVAVGDA
AKRKVLADIS SLGTNTIEIF PGKDMGDVRS SKIKTLVAAD ARALAQQPYI DGVTPTVSTT
STLRYGGLEA NALVNGVGDQ YFDVKGTKLA SGRFFDASGL RDIVQDVVID EKTRQTFFAD
VAGGAVGKVI LIGKVPCRIV GVMQQQQSGF GSNQNLSVYL PYTTVQARFL GNSSLRSILL
KVSDTVATAD AEQDVTRFLT LRHRVKDFVI LNTDDIRKTI TSTTGTLTLM IAAIAVISLV
VGGIGVMNIM LVSVSERVGE IGVRMAVGAR RSDILQQFLI EAVVVCLIGG GLGVGVAFGL
AALFNLVVPM FPLSLSGTSI AAAFVCSTGI GIVFGYLPAR QASFLDPLAA LSRD
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