| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2219 |
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| Symbol | |
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| ID | 3907961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2531968 |
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| End bp | 2533695 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637884114 |
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| Product | hemolysin activation/secretion protein |
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| Protein accession | YP_485835 |
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| Protein GI | 86749339 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0458384 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.400148 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGATTCG AAATTAGCTA TCAGCGTCGC GGCTCCACGG CCGCGCGCGC GGCGGTGTTT
TGCCTGAAAT CGGCGACGGT CGGACTGGCC GCAGTCGGCC TGGTGAGGCC GGCTGACGCC
CGCGAGGTTG CCGTCTCGGC CGCAGCGCAG CCGGCCGCGG CGCAGCCGTC CAATCCGGCC
GCTCAACCGC AGCCGGCGCA ACGCTTCGAC ATCGATGATT TCGCAATCCA GGGCGCCGAC
AAGTTGCCGC AGATCGAGAT CGAAGAGGCG GTCTATCCGT TTCTCGGACC GAACAAGACG
GCGGATGACG TCGAGAAGGC GCGGGCCGCG CTGGAGAAGG CGTATCACGA CAAGGGATTT
CAGACCGTCA GTGTGGCGGT GCCTCCACAG AATGTCGGGC GCAAGGTGGT GGTCCTGAAG
GTCACCGAGA TGAAGGTCGG CCGGCTGCGG GTGAAGAATT CGCGTTATTT CGACGTCGAC
AGGATCAAGC AGACGGCGCC GTCGCTGAAG GAGGGCACGG TTCCTAACTT CAAGGACGTC
ACCAAGGACA TCGTCGCGCT CAACCAGTGG CCCGACCGCC GGGTCACACC CGCGCTGCGA
GCCGGCGTCG CACCGGGCAC GGTCGACGTC GACCTCAACG TCGAAGACAA GGCGCCGATC
CACGCTTCCG TCGAAGTGAA CAATCGCCAG TCGCCGAGCA CCACGGCGAC GCGTCTGAAC
GCCACGGTCC ACTACGACAA TCTCTGGCAG CTCGGGCATT CGGCGAGCTT CACCTATCAG
GTCGCGCCGG AGCGGCGGCA GGATGCCGAG GTGTTCTCCG GCTCGTACCT CGCGCGGCTG
CCCAATCTCG ATTGGATCAA CCTGCTGATC TACGGCGTGT CGTCGAGTAG CAGCGTCGCC
AGCGTCGGCG GTACCAACAT CGTCGGTCCC GGCCAGATCA TCGGCACGCG TGCGATAATG
ACGTTGCCGG GGCGCGACGG CTTCTTTCAC ACGCTGTCGG CGGGCCTCGA CTACAAGCAT
TTCGACCAGA CGGTGGCGCT CGGCGCAGAC GCCTTCTCGT CGCCGGTCAC CTACTATCCG
GCAGTCGCCA GCTACGGCGC GACCTTCCAG GGCGAAAACT ACACAACGCA GTTCAACGCC
TCGGTCACCT ACAATCTGCG AACCCTGTCG AGCAGCGCCG CCGATTTCGA CGCCAAGAGA
TATTTCGCAT CGCCGAGCTT CACCCATTTC AACGCGGATG TGTCGCATAC CCAGGAATTG
CCTGAGGGAT TGCAGCTCTG GGGCAAGGTC GCGTCGCAGG TCGCGGACGG ACCGTTGGTG
TCGAGCGAGC AGATCAGCGT GGGCGGCATG GACACCGTGC GCGGCTATCT CGAATCCGAA
ACGCTCGGCG ACGACGGCGT CGTCGGCAAT TTCGAACTCC GTAGTCCGGA CATCGGTGCC
TGGCTGCAGA AGGAGATGAA GGACGAGACC GGGCAGGGAA CACCCCGCTT CACCACGTTC
AACGAGTGGC GGGTCTTCGG CTTCGCGGAC GCGGGCCACG CCAACGTTCA GCGGCCGTTG
CCCAACCAGA TCTCGTCGTT CGACCTGTGG AGCTACGGCG TCGGCTCCCG GTTCAAAGTG
TTCAGCACGA TTAACGGGGT CGTCGTGCTG TCGGTGCCGA TGAAGGACCA AGCCTACACC
CGCGCGGGTG ATCCGCGCTT CAATTTCCGT GTTTGGGGCG AATTCTGA
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| Protein sequence | MRFEISYQRR GSTAARAAVF CLKSATVGLA AVGLVRPADA REVAVSAAAQ PAAAQPSNPA
AQPQPAQRFD IDDFAIQGAD KLPQIEIEEA VYPFLGPNKT ADDVEKARAA LEKAYHDKGF
QTVSVAVPPQ NVGRKVVVLK VTEMKVGRLR VKNSRYFDVD RIKQTAPSLK EGTVPNFKDV
TKDIVALNQW PDRRVTPALR AGVAPGTVDV DLNVEDKAPI HASVEVNNRQ SPSTTATRLN
ATVHYDNLWQ LGHSASFTYQ VAPERRQDAE VFSGSYLARL PNLDWINLLI YGVSSSSSVA
SVGGTNIVGP GQIIGTRAIM TLPGRDGFFH TLSAGLDYKH FDQTVALGAD AFSSPVTYYP
AVASYGATFQ GENYTTQFNA SVTYNLRTLS SSAADFDAKR YFASPSFTHF NADVSHTQEL
PEGLQLWGKV ASQVADGPLV SSEQISVGGM DTVRGYLESE TLGDDGVVGN FELRSPDIGA
WLQKEMKDET GQGTPRFTTF NEWRVFGFAD AGHANVQRPL PNQISSFDLW SYGVGSRFKV
FSTINGVVVL SVPMKDQAYT RAGDPRFNFR VWGEF
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