| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2216 |
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| Symbol | |
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| ID | 3907958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2529144 |
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| End bp | 2529851 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637884111 |
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| Product | TonB-like protein |
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| Protein accession | YP_485832 |
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| Protein GI | 86749336 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.226683 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGGACA GTCCAAACCG TGCCGCGCCG CCGTCCAGTG CGGCCCCCGA TTGGCGCGCG
ACTGCGACCG GGCTCGAACT GCGCTGGTTC GCTGTCGCCG CAGTGGCCGT GCCGCTGCTT
CTCGCCGCGG GCGTGTATTG GTTGCACCGG CTGCCGCCTG GTCCCAATCT TCGCGGCGAC
GAAAATCTCA TCGAGGTCCG GTTGATAGGT CCGCAAAACG CCGGACCTTT GAACCAGGAA
CGACCCCAAG CCGCGCCGGC AGAACGGGCC CAGGCAGAGT CCCCGGCGGA CTCGCCAGCG
CGACCGCTGC CCGAAGTCGC ATCGATCCCG GATCCAGCGC CCGCCGAGCA GGTCGACCCG
GCGCAAGCCC CGCGGACCCG GGCGACCGCA CCCCCGGTCT CGCGCATCGC CCGTGAACAG
AAGGCCGCCA CGTTTCAGCG GACGCTGCTG TCGCATATCG CCCGGTTCCG CGAATATCCA
GACGCGGCCA AGCGCAGTCA GACCCAGGGC GTCGTGCGAC TGCTGTTCGC AATGCGGCGT
GACGGCAGCG TCGGCCGCAT CACGATCAGG GCCAGCTCCG GGTCCGCGAT CCTCGATGGC
GCGGCGATGG CGACGCTGCG AAGAGCGCAG CCGCTGCCGA GAATTCCGGA TGACTTGCCG
GACAACCTGA ATATTCTTGT GCCGGTCGCG TTCGATTTGT CGTACTGA
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| Protein sequence | MWDSPNRAAP PSSAAPDWRA TATGLELRWF AVAAVAVPLL LAAGVYWLHR LPPGPNLRGD
ENLIEVRLIG PQNAGPLNQE RPQAAPAERA QAESPADSPA RPLPEVASIP DPAPAEQVDP
AQAPRTRATA PPVSRIAREQ KAATFQRTLL SHIARFREYP DAAKRSQTQG VVRLLFAMRR
DGSVGRITIR ASSGSAILDG AAMATLRRAQ PLPRIPDDLP DNLNILVPVA FDLSY
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