Gene RPB_2213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2213 
Symbol 
ID3907955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2514804 
End bp2515781 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content67% 
IMG OID637884108 
Productputative FecR 
Protein accessionYP_485829 
Protein GI86749333 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.442759 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAGAT CCGACGGGGG CGAAAGAACC GAATTGAGAA CCGACGCACG CCGGCTGATC 
ACGCATCTGC TCTCCGGAGA AGCCAAACGC TCGGATTTCG ATGCCGCTGA CCTCTGGCGC
CGGCAGAGCC CCGCGCACGA GCGAGAGTTC GCCGAGGCGG CAAGGTTGTG GCGCAATCTC
GGCGCCGCGG GGCGAGACTT GGTGGCCCAG GAGGGCGTCC CGGTCTGGCC GTCGCCAGCG
GCGCCGATGA GTCGGCGTGC GATGTTGGTG GGCGGTGGTG CGCTCGCCGC CGCTGCCGCG
AGCGCCGCGG TGGTGATGCC GCCGCTTGGC TTGTGGCCGT CGCTCGACGA GCTGCGAGCC
GACTATCGGA CAGCCACCGG CGAGCAGCGA CGCCTGATGT TGCCGGGCGA CGTAGCGGTG
CGGATGAACA CGCAGACCGC GATTTCGGTG CCGGTTTCCC ACGGCGATCT GGACCAGATC
ACGCTGATTG CAGGCGAGGC GTCGTTTGAA GTTCCGGCGC AGGCGGCGAG GGCGCTCGTG
GTTGCGGCCG ACAGCGGGTT GACGATCGGC AGCGTTGCCC GGTTCGACAT CCGCAACTTC
GGAAACAGCG TCTGCGTAAC CTGCTCCCAG GGCAAAGTGC GTGTCGAGAG CGGACCGCAC
GTCGCCACAC TCGGCGCCAA TCAGCAGCTC CGTTATGACC GCGCCGGGCT CGGCCAGACG
GTGTCGGTCA ATCCGAACGA CGCCGCAGCC TGGCTCGACG GGGTGTTGAT CTTTCGCGAC
ACGCCGCTCG CCGATGTCAT CGCGGAGTTG AACAGGTATC GACCCGGCAA GATCGTCCTG
ATGCGATCTG CGCTGGCGAA CAGGACCGTC AACGGCCGTT TTCGCGTCGA TCGCATCGAT
GATGTGTTGA CCTGGCTGGC TCAGGCTTAC GGCGCCAGGA CCCGGTCTCT GCCGGGCGGC
GTCATGCTCG TAGTCTAG
 
Protein sequence
MIRSDGGERT ELRTDARRLI THLLSGEAKR SDFDAADLWR RQSPAHEREF AEAARLWRNL 
GAAGRDLVAQ EGVPVWPSPA APMSRRAMLV GGGALAAAAA SAAVVMPPLG LWPSLDELRA
DYRTATGEQR RLMLPGDVAV RMNTQTAISV PVSHGDLDQI TLIAGEASFE VPAQAARALV
VAADSGLTIG SVARFDIRNF GNSVCVTCSQ GKVRVESGPH VATLGANQQL RYDRAGLGQT
VSVNPNDAAA WLDGVLIFRD TPLADVIAEL NRYRPGKIVL MRSALANRTV NGRFRVDRID
DVLTWLAQAY GARTRSLPGG VMLVV