| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2205 |
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| Symbol | |
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| ID | 3907947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2497408 |
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| End bp | 2497989 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637884100 |
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| Product | sigma-24 (FecI-like) |
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| Protein accession | YP_485821 |
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| Protein GI | 86749325 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.367222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.070332 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAGAG CTCCGTGCAA TTCGGATGGG ACCGCGCATG GTCTCGGAGA GGCAGTTCCT
GTCTTGCGTG AATCTTTCGG CCAACGGAGT CTGTTGACGG TCATGGTCGA TCGCTACGGC
GATCTGCGAC GCCGTCTGAC ACGTCGATTG GGATCTGCCG ACTGGGCCGA CGATGCGTTG
CAAGATACTT ATGTGCGCCT GAACGGCAGC GAAGTCGTCG GCGAGGTGCG CAACCCCGTT
GCATATTTGT TGCGCGCGGC CTTCAACAAC GCGTTGAATC TGCGGCGGGC GGAAACCAGA
CGCCTGAGCG CCGATGAAGT CGACGCGTTG CTGCACATTG CCGACGACGC CCCCGACGTC
TTGCGGATCA TCGAGGGGCG CTCCGACATC GAGAGGCTGA AGCGGATCAT GACGGAGTTG
ACGCCGCGCC AGCGGGAGAT CCTGCTCGCA GCCCGCGTCG ACGGCCTGTC GCGGCATGAG
ATCGCCGACC GGTTGGGGAT CTCGGTGAGT CTGGTCGAGA AAGAACTGCG ACGCGCTCAA
GAATTTTGCA TGTTACGCTT CCAGCAGAAA ACGCCGCGGT AG
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| Protein sequence | MSRAPCNSDG TAHGLGEAVP VLRESFGQRS LLTVMVDRYG DLRRRLTRRL GSADWADDAL
QDTYVRLNGS EVVGEVRNPV AYLLRAAFNN ALNLRRAETR RLSADEVDAL LHIADDAPDV
LRIIEGRSDI ERLKRIMTEL TPRQREILLA ARVDGLSRHE IADRLGISVS LVEKELRRAQ
EFCMLRFQQK TPR
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