Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2196 |
Symbol | ppnK |
ID | 3907936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 2489806 |
End bp | 2490585 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637884089 |
Product | inorganic polyphosphate/ATP-NAD kinase |
Protein accession | YP_485812 |
Protein GI | 86749316 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0061] Predicted sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0360183 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCCCT CCCCGCGCCG CGACCGCATC GCCTTCGTCG CGAGCCAGAG CGCGGAAGCG CAAGCCGCAC AGGCACAACT CGTGTCGCTC TACGGCGATC ACGACGCCGC CGAGGCCGAC GTCGTGGTCG CGCTCGGCGG CGACGGGCTG ATGCTGCAGA CGCTGCATCA GCAGATGCGC AGCGGCCTGC CGATCTACGG CATGCACCGC GGCACGGTCG GCTTCCTGAT GAACGAATAT TCGATCCACG ATCTGCGCGG ACGGCTCGAG GCCGCGCGCG AGACCGTGAT CCATCCGCTG CTGATGCGCG CCACCGACAT CTACGGCGAG GTGCACATCC ACCACGCCAT CAACGAGGTC TCGCTGTTTC GGCAGAGCCA TCAGGCGGCG CGGCTGCGCA TCATCATCGA CGAGCGCGAG CGCATGAGCG AGCTCGTCGC CGACGGCATT CTGGTCGCGA CGCCGGCGGG CTCGACCGCG TATAATCTGT CGGCGCAGGG CCCGATCCTG CCGATCAACG CGCAGTTACT TGCGCTGACG CCGATCTCGG CGTTCCGGCC GCGGCGCTGG CGCGGCGCGC TGTTGCCGGA CAACGCCTTC GTGGTGATCG AAGTGCTGGA AGTCGACAAG CGCCCGGTGG CGGCGGTGGC CGATCACGAC GAGGCGCGCG ACGTGCGACG GGTCGAGGTG ATTTCCGACA AGACCATCGC GCTGCGGATG CTGTTCGACC CCGGCCACAG CCTCGAGGAA CGCATCCTCA GCGAGCAGTT CGGCACCTGA
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Protein sequence | MTPSPRRDRI AFVASQSAEA QAAQAQLVSL YGDHDAAEAD VVVALGGDGL MLQTLHQQMR SGLPIYGMHR GTVGFLMNEY SIHDLRGRLE AARETVIHPL LMRATDIYGE VHIHHAINEV SLFRQSHQAA RLRIIIDERE RMSELVADGI LVATPAGSTA YNLSAQGPIL PINAQLLALT PISAFRPRRW RGALLPDNAF VVIEVLEVDK RPVAAVADHD EARDVRRVEV ISDKTIALRM LFDPGHSLEE RILSEQFGT
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