| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2152 |
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| Symbol | |
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| ID | 3908567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2442386 |
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| End bp | 2443225 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637884046 |
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| Product | rhomboid-like protein |
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| Protein accession | YP_485769 |
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| Protein GI | 86749273 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0896724 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.106216 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATCGC ATCGCCTCCG GGCCGCGCCG CGGCCGGGCG CTCGTAGCAG GTCGTTCACG
TTGGATTCGT CGCCCGAAAC GCAGCCGCTG CCGCCGTCGC CGCCGGAGCC GCCGCGCGAA
CCGATCCTCA ACCTGCCGCG CGCGCTGACC GCCTATGTGG CGCTGCTGGC GGTGATCCAT
CTGCGCGTGC TGCTGCCGCC GGACATCGAC TACTGGACCA TCGAGATGTT CGGCTTCATC
CCGAAGCGCT ACGACGCCAC GCTGCTGTCG GCGCCGTTTC CGGGCGGCAC CGGCGCCAAG
ATCTGGACCT TCGTCACCTA TTCGCTGCTC CACGCCAATC TCAGCCACAT CTTCTTCAAC
GTGCTGTGGC TGCTGCCGTT CGGCAGCGCG CTGGCGCGGC GGTTCGGCGC GGCGCGGTTC
TTCCTGTTCA TGGCGGTCAC CGCGATCGGT GGCGCGCTGG CGCATCTTCT CACTCACGCC
CACGAGATCG CGCCGATGAT CGGCGCCTCG GCTTCGGTGT CGGGCGCGAT GGCCGCGGCG
ATCCGCTTCG CCTTCGCCCG CGGCAGCTTC CTGTCGTTCC GCAGCGGCGA CGCCGACGCC
GCGGCGCGGG TGCCGGCGCA GCCGCTGCTG CGGGCGCTGC GCGATCCGCG GGTGATCGCC
TTCCTGGCGA TCTGGTTCGG CATCAACATC ATCTTCGGCG TCGGCTCGAT CGCGGTCGGC
AACGAAGGCG CCAGCGTCGC CTGGCAGGCG CATATCGGCG GCTTCTTCGC CGGCCTGCTG
CTGTTCTCGC TGTTCGACCC GGTGCCGCGC CGCGCGCCGG CGGTGATCGA TCCGAACTAA
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| Protein sequence | MGSHRLRAAP RPGARSRSFT LDSSPETQPL PPSPPEPPRE PILNLPRALT AYVALLAVIH
LRVLLPPDID YWTIEMFGFI PKRYDATLLS APFPGGTGAK IWTFVTYSLL HANLSHIFFN
VLWLLPFGSA LARRFGAARF FLFMAVTAIG GALAHLLTHA HEIAPMIGAS ASVSGAMAAA
IRFAFARGSF LSFRSGDADA AARVPAQPLL RALRDPRVIA FLAIWFGINI IFGVGSIAVG
NEGASVAWQA HIGGFFAGLL LFSLFDPVPR RAPAVIDPN
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