Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2145 |
Symbol | |
ID | 3908560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 2434591 |
End bp | 2435415 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637884039 |
Product | outer membrane protein |
Protein accession | YP_485762 |
Protein GI | 86749266 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3637] Opacity protein and related surface antigens |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.225218 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.619069 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGGGCCGAA ATGAGCTAGT GTTTTCTCGA GATGGAATCA CTCGACCCTT GGTTCTGATG GAGGAGGAAT TGGCATTGAA GACGTTTCTG TTCGGTACGG CGGCGGCACT CGTGATGATG AGTTCAGCCT CGGCGGCTGA TCTGGCGGCC CGGCCCTACA CCAAGGCGGC ACCGATCGTG GCCCCGGTGT TGACCTGGAA CGGCTTCTAT ATCGGCGGTC AGGGCGGCTA TGGCTGGGGC TCGAGCGACG AGACCGTCTT CGCCGCCGCC AACACCCCGG CGTTCTTCGG CTCCCAGAAG TACGACACCA GCGGCGGCTT CGCCGGCGGC GTGGTCGGCT ACAACTGGCA GAGCGGCGCC GTCGTGTTCG GTCTCGAAGG CGATTACCAC TGGGCGGACA TCAACGGCAC GTCGTCCGTG ATCAATGTCG GCCCGCCGAA TCTCGGCGAC ACCTATTCCA CCAAGCTGCG CGGCTTCGGC GACATCAAGG GCCGTCTCGG CTATGCGGCC GGTCCGGCGC TGTGGTTCGT CAGCGGCGGT GCCGCGGTCG GCGACCTCCA GCACCGCTAT GACGGTGGCG CTGCCAACAC ATTCGTGCAG AACAAGACCA AATGGGGCTA CACGGTCGGT GCCGGCGTCG AATACATGTT CGCGCCGAGC TGGTCGGCCA AGCTCGAATA CAACTACATC GATCTCGGCC GCAGCACGAT CCAGTACACC GCCGCGCCGA CCAACCGCTC GGAGTGGAAG GACACCTTCC ACACCGTCAA GGTCGGCATC AACTATCACT TCAACTGGGG TGGCCCGGTC GTCGCCAAGT ACTGA
|
Protein sequence | MGRNELVFSR DGITRPLVLM EEELALKTFL FGTAAALVMM SSASAADLAA RPYTKAAPIV APVLTWNGFY IGGQGGYGWG SSDETVFAAA NTPAFFGSQK YDTSGGFAGG VVGYNWQSGA VVFGLEGDYH WADINGTSSV INVGPPNLGD TYSTKLRGFG DIKGRLGYAA GPALWFVSGG AAVGDLQHRY DGGAANTFVQ NKTKWGYTVG AGVEYMFAPS WSAKLEYNYI DLGRSTIQYT AAPTNRSEWK DTFHTVKVGI NYHFNWGGPV VAKY
|
| |