Gene RPB_2144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2144 
Symbol 
ID3908559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2433724 
End bp2434257 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content63% 
IMG OID637884038 
ProductMarR family transcriptional regulator 
Protein accessionYP_485761 
Protein GI86749265 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0843453 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAATC GGCAAAATGC TCGAAAGCTC GCAGCGGCTG ACGCGGCGCC CGCCCGGGCG 
ACAGCGGAGA ACGATCATCG CCTGTCCTAT CAGGTGATCT GGGACTTCGT GTCGATCAGC
AACAATCTCG AGGACATGCG CCGCGCCTGG GCGAAGCTGT TCGGCATCAG CGGCTCGCAA
TGGCTGATCC TGATGGCGAT CAGCGACCTC GATCAGGGCA ACGGCGTTTC GGTCGGCGAC
GTCTCCGACA AGATCCACGC GGTCTCGACC TTCGTGACGA CGCAGACCAA GATCCTCGAG
CGGCTCGGCC TGATCAACCG CGTCAGCTCG ACCACCGACG CCCGCGTCGT GCTGATGTCG
CTGTCGGAGA CGGCGCAGAC CAAAATGACC GAACTGAAGC CGCGCTGGGA GGCGCTGCAC
GAATACATCT TCCGCGACTT CGACGCCGAG GCGCTGCACG ACGTCAAGGC CAAGCTCGAC
ATGCTGAAGC GTCGCACCAA GGTCGCGATG CAGCGCGTCG CGGACGACAA TTAG
 
Protein sequence
MPNRQNARKL AAADAAPARA TAENDHRLSY QVIWDFVSIS NNLEDMRRAW AKLFGISGSQ 
WLILMAISDL DQGNGVSVGD VSDKIHAVST FVTTQTKILE RLGLINRVSS TTDARVVLMS
LSETAQTKMT ELKPRWEALH EYIFRDFDAE ALHDVKAKLD MLKRRTKVAM QRVADDN