Gene RPB_2139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2139 
Symbol 
ID3908554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2430077 
End bp2430607 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content67% 
IMG OID637884033 
Producthexapaptide repeat-containing transferase 
Protein accessionYP_485756 
Protein GI86749260 
COG category[R] General function prediction only 
COG ID[COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.328816 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.883722 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATCT ACGAGCTGGA CGGGCAGCGC CCTGATCTTC CGCAGGACGG AAACTACTTC 
ATCGCCGACA CCGCCACGGT GATCGGCAAG GTGCGCCTGA AGCCGTCGGC CACCGTCTGG
TTCGGCGCGG TGTTGCGCGG CGACAACGAG TGGATCGAGA TCGGCGAGGG CTCCAACGTG
CAGGACGGCT CGACCTGCCA CACCGATCCC GGGTTTCCGC TGACCGTCGG CCGCAATTGC
ACGATCGGCC ACAATGTCAT CCTGCACGGC TGCACCATCG AGGACGGCGC CCTGATCGGG
ATGGGCGCGA TCGTGATGAA CGGCGCCCGC ATCGGCCGCG GCTCGATCGT CGGTGCCGGC
GCGATCGTCA CCGAGGGCAA GTCGTTTCCG GAGAATTCGC TGATTCTCGG CGCGCCGGCC
AAGCTGGCGC GGACGCTCGA TCCGGCGCAG GCGGCCGCGA TGGAGCGGCC GGCGATGTTC
TACGCGGCCA ATGGCCCGCG TTACGCCAAG GGCCTCAAGA AGATCGGCTG A
 
Protein sequence
MAIYELDGQR PDLPQDGNYF IADTATVIGK VRLKPSATVW FGAVLRGDNE WIEIGEGSNV 
QDGSTCHTDP GFPLTVGRNC TIGHNVILHG CTIEDGALIG MGAIVMNGAR IGRGSIVGAG
AIVTEGKSFP ENSLILGAPA KLARTLDPAQ AAAMERPAMF YAANGPRYAK GLKKIG