| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2126 |
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| Symbol | |
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| ID | 3908540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 2418572 |
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| End bp | 2419744 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637884019 |
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| Product | peptidase M20D, amidohydrolase |
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| Protein accession | YP_485743 |
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| Protein GI | 86749247 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
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| TIGRFAM ID | [TIGR01891] amidohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.587793 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGACCA TCGACCGTAT CGATGCCTTC GCCGACGAAC TGACCGCGAT CCGCCGCGAT
CTCCACATGC ATCCGGAAAT CGGCTTCGAG GAGGTCCGCA CCTCCAACAT CGTCGCCGAA
AAGCTCGACC AATGGGGCAT CGAGGTGCAT CGCGGGCTCG GCGGCACCGG CGTGGTCGGC
GTGCTGAAGG GCAAAGGCTC GGCAGGCCGC CGCATCGGCC TGCGCGCCGA CATGGATGCG
CTGCCGATGG AGGAGCACAC CAATCTGGCG TGGCGCTCGA CCATTCCCGG CCGCTTCCAC
GGCTGCGGCC ATGACGCCCA CACCACCATG CTGCTCGGCA CCGCGCGGTA TCTCGCCGAG
ACCCGCAATT TCGACGGCAC CGTGCATTTC ATCTTCCAGC CGGCCGAGGA AGGCCTCGGC
GGCGCGCGCG CGATGCTGAA GGACGGGCTG TTCCAGAAAT TCCCCTGCGA CGAACTCTAC
GGCCTGCACA ACGCCCCCGA CCTGGCCCAT GGCGAGATCG CGATCCTGCC CGGGCCGGCA
ATGGCCGGAG CCGACTTCTT CGACATCACC ATCTCGGGCT ACGGCGCCCA CGGCGCGATG
CCGGAGCGCT CCAAGGACCC CGTGGTGATC GCGATGACGC TGGGGCAAGC GCTGCAGACC
ATCGTCAGCC GCAACGTCGA TCCGTTGCAA TCGGCGGTGC TGTCGATCAC CCAGATCCAT
TCCGGCTCGG CCTATAACGT CATCCCCGGC GAAGCGCGGC TCGCCGGCAC CGTCCGCGCC
TTCTCCGACG ACGTGCGCAA GCTGGTGCGC GAGCGGATGC GGGCGCTGGC CGCCGGCATC
GCGGCGGCGT TCGACGTCGA AATCAAGGTC GAGATCCGCG ACATCTTCAG CGTGCTGGTG
AATCAGCAGG CGCAGAGCGA GGTGGTCGCC GAAGTCGCGC GCAGCGTGGT CGGCGAGGCC
AATGTCATCA CCCGCTCGCA GCCGAAGATG GGCAGCGAGG ATTTCGCCGA CATGCTGCAG
GCGATCCCCG GCGCTTACTT CTGGGTCGGC CATGACGGCG ACGTGCCGGT GCACAATCCC
GGCTACGTGC TCGACGACAA GATCCTGCCG ATCGGCGCAT CGATGTTCGC GCGGATCATC
GAAACCCGTC TGCCGGTGGC CGCCAATGTC TGA
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| Protein sequence | MPTIDRIDAF ADELTAIRRD LHMHPEIGFE EVRTSNIVAE KLDQWGIEVH RGLGGTGVVG
VLKGKGSAGR RIGLRADMDA LPMEEHTNLA WRSTIPGRFH GCGHDAHTTM LLGTARYLAE
TRNFDGTVHF IFQPAEEGLG GARAMLKDGL FQKFPCDELY GLHNAPDLAH GEIAILPGPA
MAGADFFDIT ISGYGAHGAM PERSKDPVVI AMTLGQALQT IVSRNVDPLQ SAVLSITQIH
SGSAYNVIPG EARLAGTVRA FSDDVRKLVR ERMRALAAGI AAAFDVEIKV EIRDIFSVLV
NQQAQSEVVA EVARSVVGEA NVITRSQPKM GSEDFADMLQ AIPGAYFWVG HDGDVPVHNP
GYVLDDKILP IGASMFARII ETRLPVAANV
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