| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2125 |
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| Symbol | |
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| ID | 3908539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 2417164 |
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| End bp | 2418579 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637884018 |
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| Product | amidase |
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| Protein accession | YP_485742 |
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| Protein GI | 86749246 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.543221 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGACG GTTTGACGAG CAAGACCACC GCGCTGCACG ACCTCAGCGC CACCGAACTG
CTGGCCGGCT ACTACGCCAA ACAGTTCTCG CCGTCGGAGG TGATCGACGA CGTCATCGCC
CAGGCGCAGC GCTGGGAGCC GCATCTCAAC GCGCTGTATG CGTTCGATCC GGACGGCGCC
CGCGCCGCGG CGAAGCAATC GACCGAGCGC TGGCACAAGG GCGAACCGCA GGGCGTGCTC
GACGGCGTGC CGGTGACGAT CAAGGAGAAC GTCGCGACCA AGGGCGTGCC GATTCCGCTC
GGCGTGCCGG TCACCGCGCC GACGCCGGCG TCGGTCGATG CGCCACCGGC GGCGCGGCTG
CGCGAGGCCG GTGCGATCCT CTGGACCAAG ACGACGATGC CGGATTTCGG CATGCTGTCG
TCCGGCCTGT CGAGCTTCCA CGGCGTCACC CGCAATCCGT GGGACACCAC GCAAAACACC
GGCGGCTCGT CCTCCGGCGC GGGCGCAGCG GGGGCTGCGG GCTACGGGCC GCTGCATCTC
GGCACCGACA TCGGCGGCTC GGTGCGGCTG CCGGCGAACT GGTGCGGCCT GTTCGCGCTG
AAGCCGTCGC TCGGCCGCGT GCCGATCGAT CCGCCTTATG TCGGCCGCTG CGCCGGGCCG
ATGACACGCA CCGTCGACGA TTCCGCGCTG ATGATGAGCG TGCTGTCGCT GCCCGATGCG
CGCGACGGCA TGAACCTGCC GCCGAACGAT TTCGCCTGGC ACGATCTGGC GACCGATCTG
CGCGGCAAGA CCATCGGCCT CGTCACCGAT CTCGGCTTCG GCATGAAGCT CGACGACGAG
GTGCGCCGCG TCGTCACCGA TGCCGCGCGA ACCTTCGAGG CGCAGGGCGC GATCGTGCGC
GAGGTGTCGC TCGGCTTCAC CCGCGAGATG ATGGACGGGC TCGACAATTT CTGGCGGGCG
CGGATGTGGG ACGACGTCTC CAAGCTCAGC GAGGCGCAGC GCGCGCAGGT GCTGCCCTAC
ATCGTGCGCT GGGCCGAGCG CGGCGCGACG CTCAGCGGCG TCGAGGTGAT GCGCGGCTTC
AACCAGACCA TGGCGGTGCG GGCGATGGCG GCGAAACTGT TCGCCGAGAT CGACTATTTG
ATCTCGCCGG TGGCGCCGGT GGTGAGCTTC CCTGCCGAGC TGCCCTCGCC GCTCGACGAT
CCGGAGATTC CGTTCGACCA CATCCTCTAT ACCGTGCCGT GGAATATGTC GGAGAATCCG
GCGGCGTCGA TCAATGGCGG CTACAGTTCG AACGGCTTTC CGATCGGCGT GCAGATCGTC
GGCCGACGCT TCGACGATCT CGGCGTGCTG CGGATGGCGA AGGCGTTCGA GGGCCTGCGC
GAGGCGCAGA AGCCGTGGCC GACCGTGCCG CGCTAG
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| Protein sequence | MSDGLTSKTT ALHDLSATEL LAGYYAKQFS PSEVIDDVIA QAQRWEPHLN ALYAFDPDGA
RAAAKQSTER WHKGEPQGVL DGVPVTIKEN VATKGVPIPL GVPVTAPTPA SVDAPPAARL
REAGAILWTK TTMPDFGMLS SGLSSFHGVT RNPWDTTQNT GGSSSGAGAA GAAGYGPLHL
GTDIGGSVRL PANWCGLFAL KPSLGRVPID PPYVGRCAGP MTRTVDDSAL MMSVLSLPDA
RDGMNLPPND FAWHDLATDL RGKTIGLVTD LGFGMKLDDE VRRVVTDAAR TFEAQGAIVR
EVSLGFTREM MDGLDNFWRA RMWDDVSKLS EAQRAQVLPY IVRWAERGAT LSGVEVMRGF
NQTMAVRAMA AKLFAEIDYL ISPVAPVVSF PAELPSPLDD PEIPFDHILY TVPWNMSENP
AASINGGYSS NGFPIGVQIV GRRFDDLGVL RMAKAFEGLR EAQKPWPTVP R
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