| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2123 |
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| Symbol | |
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| ID | 3908537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2414132 |
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| End bp | 2415850 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637884016 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_485740 |
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| Protein GI | 86749244 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.500205 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACAT TCCAACAGGC CCGTTCCTTC CTGCTCGACC ATCGCACCGA CTACTCCGCC
GCCGTCGCGG GTTTCCGCTG GCCCGATCCG GTGCCGTTCA ACTGGGCGCT CGACTGGTTC
GATGCCGAGT TGGCGACGTC CGGCAGCCGT AACCGTCCCG CGCTGTGGAT CGTCGACGGC
ACCACCGGCC GGGAGGAGAA GCCGAGCTTC GCGCATCTGT CGAAGCGCTC GAACCAGGTC
GCGAACTATC TGCGTGCCAA GGGCCTGAAG CGCGGCGATC ACCTGCTGCT GCTGCTCGGC
AACGTCGTGC CGTTGTGGGA GGTGATGCTG GCGGCGATCA AGCTCGGCCT CGTCACCATC
CCGGCGACCA CGCTGCTGAC GCCGGACGAG TTGCGCGACC GGCTCGAGCG CGGCCGCGCC
AAGGCGGTGG TCGCTGCGCC CGACCAGATC GCCAAATTCA AGGGCCTCGG CGGCGACGAT
CTGCTGCGCG TCGTGGTCGG CGACGCCCAG GACGGCTGGC TCAATTACGA CGGAACCGCG
CTGCAGCCCG ACGTCTTCAC GCCGGACGGG CCGACGCAGG CTGACGATCC GATGCTGCTG
TATTTCACCT CCGGCACCAC GGCGAAGCCG AAGCTGGTGC GGCACAGCCA GCGCAGCTAT
CCGGTCGGCG CGCTGTCGAC GATGTTCTGG CTCGGGCTGC AGCCCGGCGA CGTGCATCTC
AACATCTCGT CGCCGGGCTG GGCCAAGCAC GCCTGGAGCT GCTTGTTCGC GCCGTGGAAC
GCCGGCGCCA CCGTGTTCGT CGTCAACCAG CCGCGGTTCG ACGCCAAGAG TCTCTTGGCG
ACGATCGGCC GCTGCGGCGT CACCACGCTG TGCGCGCCGC CGACGGTGTG GCGGATGTTC
ATTCAGGAGA AGCTCGCGGA CTATCAAGTG TCGCTGCGCG AGGTCTGCGG CGCCGGCGAG
CCGCTCAATC CGGAAGTGAT CGATCAGGTC AAGGCCGCCT GGGGCCTCAC CATCCGCGAT
GGCTACGGCC AGACCGAGAC CACCGCGATG GTTGGCAATT CGCCGGGGCA GGCAGTGAAG
ATCGGCTCGA TGGGCCGGCC GATGCCGGGC TACGTCGTCA AGATCACCGA TGCGGACGGT
CATCCGGCCA AGGAAGGCGA GATCACGCTG GCGCTGGGCG ACGCGCGCCC GGCCGGCCTG
ATGCAGGGTT ATCAAAGCGA GGGCGGCAAG CTCTCGGGCG CCGACGGCGA CATCTATCGC
TCCGGCGACG TCGCCTTCGC CGACGACGAC GGCTATCTCA CCTTCGTCGG CCGCACCGAC
GACGTGTTCA AATCGTCGGA CTATCGGATC TCGCCGTTCG AACTGGAGAG CGTGCTGCTC
GAACACGATG CCGTCGCCGA AGCCGCGGTG GTGCCGAGCC CGGACCCGAT CAAGCTGGCG
ATCCCGAAGG CCTATGTGCT GCTGACGGCG GACGCGGAGC GCTCGCGCGA CACCGCGCTG
TCGATCTTCC GCCACATGCA GGCGCGGATG GCGCCGTTCA AGCGCATCCG CAAGCTCGAA
CTGGTCACCG AACTGCCGAA GACGATCTCG GGCAAAATCC GCCGCGTGCA TCTGCGCCGC
ATCGAGCACG AGCACGACCA GACCGACTCG TTGCGCGGCG TCGAGTTTCG CGAAGAGGAT
TTCCCCGAGT TGAAAGCCGC GCCGACGCAG GAGGGGTGA
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| Protein sequence | MTTFQQARSF LLDHRTDYSA AVAGFRWPDP VPFNWALDWF DAELATSGSR NRPALWIVDG
TTGREEKPSF AHLSKRSNQV ANYLRAKGLK RGDHLLLLLG NVVPLWEVML AAIKLGLVTI
PATTLLTPDE LRDRLERGRA KAVVAAPDQI AKFKGLGGDD LLRVVVGDAQ DGWLNYDGTA
LQPDVFTPDG PTQADDPMLL YFTSGTTAKP KLVRHSQRSY PVGALSTMFW LGLQPGDVHL
NISSPGWAKH AWSCLFAPWN AGATVFVVNQ PRFDAKSLLA TIGRCGVTTL CAPPTVWRMF
IQEKLADYQV SLREVCGAGE PLNPEVIDQV KAAWGLTIRD GYGQTETTAM VGNSPGQAVK
IGSMGRPMPG YVVKITDADG HPAKEGEITL ALGDARPAGL MQGYQSEGGK LSGADGDIYR
SGDVAFADDD GYLTFVGRTD DVFKSSDYRI SPFELESVLL EHDAVAEAAV VPSPDPIKLA
IPKAYVLLTA DAERSRDTAL SIFRHMQARM APFKRIRKLE LVTELPKTIS GKIRRVHLRR
IEHEHDQTDS LRGVEFREED FPELKAAPTQ EG
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