Gene RPB_2116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2116 
Symbol 
ID3908530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2407789 
End bp2408445 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content70% 
IMG OID637884009 
ProductTetR family transcriptional regulator 
Protein accessionYP_485733 
Protein GI86749237 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.332215 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTATT CCAAGGAACA CAAGCTCGAG ACCCACGCCC GCATCGTGCG GAAGGCCTCC 
GTGCGGCTGC GCGAGAAGGG CGCCCACGGC ATCGGCGTCG CCGACCTGAT GAAGGACGCC
GGCCTCACCC ATGGCGGGTT CTACGCGCAT TTCGCTTCAC GCGAGCAATT GGTGATCGAG
GCGTTCGCTT ACGCGATGGA CCGCGCCAAC GAGCGCTGGC GCAAGCTCGC CGAAGACACG
CCACCGCGCG AGATGCTGGC GATCGTCGTC AACAACTACC TCTCTGCGGC ACATCGCGAC
GACCCCGGGC GCGGCTGCGC GGTGCCGGCA CTGGGCGCCG AGATCGCCCG CGAGAGCCCG
AAGACGCGCC GCGCCTTCGC CGCCAAGCTC GAGCAGATGA TCGCGACGAT GGCGACGCGG
TTCGACGACG TGCCGCCGAA AATTGCCCGC AAGCAGGCGA TGGCGACGCT CGCCACCATG
ATGGGGGCGC TGCTGATGTC CCGTGTCGCC GGCACCGGGG AACTGTCCGA CGCGATCCTC
GAAGCCGGCC GTGACGCCGT GCTGGGCCGG GCGACGCCGG CGAAACCGCG CCCGGCGCGG
AAGCCGGCGG CGACGGCGGT GTCCCGAACC CGCAGCAAAG CCGCTTCACC GCGCTGA
 
Protein sequence
MRYSKEHKLE THARIVRKAS VRLREKGAHG IGVADLMKDA GLTHGGFYAH FASREQLVIE 
AFAYAMDRAN ERWRKLAEDT PPREMLAIVV NNYLSAAHRD DPGRGCAVPA LGAEIARESP
KTRRAFAAKL EQMIATMATR FDDVPPKIAR KQAMATLATM MGALLMSRVA GTGELSDAIL
EAGRDAVLGR ATPAKPRPAR KPAATAVSRT RSKAASPR