Gene RPB_2106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2106 
Symbol 
ID3908520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2395392 
End bp2395760 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content68% 
IMG OID637883999 
Producthypothetical protein 
Protein accessionYP_485723 
Protein GI86749227 
COG category[R] General function prediction only 
COG ID[COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.283808 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0319762 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGC CGGCGATGAT CTCCGACTGG ACCGCCGGCG ACGAGGCCAT CAGCGATCAG 
CGCTGCACCG CCTGCGGCGG CGTGCAGTAT TTCCGCCGCG ACTTCTGCGC CGCTTGCGGC
AGCAACGATC TCGCCACGCT GCGCGCCAGC GGCGAGGGCG TCGTCCACGC CGCGACGCTG
GTGCATCGCG CCGCGACGCC GGAGGCGCGT GAACATGTGC CCTTCAAGAT CGTTCTGATC
GACACCGCGG AAGGTTTCCG CATGATGGCG CACGGCGCCC AAGATCTCGC CATCGGCGAC
CGGGTGCGCG CGCGGTTTGC GCGCTTCACC GGCCGCCTCG TTCCCTATTT CGAAAGGACC
TCTGCATGA
 
Protein sequence
MSEPAMISDW TAGDEAISDQ RCTACGGVQY FRRDFCAACG SNDLATLRAS GEGVVHAATL 
VHRAATPEAR EHVPFKIVLI DTAEGFRMMA HGAQDLAIGD RVRARFARFT GRLVPYFERT
SA