Gene RPB_2101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2101 
Symbol 
ID3908515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2388707 
End bp2389876 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content67% 
IMG OID637883994 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_485718 
Protein GI86749222 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0474037 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00217907 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGCCA GCATCGTTGG ATGGGCGCAT ATGCCCTTCG GCAAGTTCGA CGCCGAGACC 
GTCGAGAGCA TGATCGTCCG CGTCGCCAAT GAGGCGATCG CCGATGCCGG CATCGCCGCC
GGCGATGTCG ATGAAATCGT GCTGGGGCAT TTCAACGCCG GCTTCTCGCC GCAGGATTTC
ACCGCCGCTC TGGTGCTGCA GGCCGATCCG GCGCTGCGCT TCAAGCCCGC CACCCGGGTC
GAGAACGCCT GCGCCACCGG CTCCGCCGCC GTGCATCAGG GCATCCGCGC GATCGAGGCC
GGCGCCGCCA AGGTGGTGCT GGTGGTCGGC GTCGAGCAGA TGACGCGGAC GCCGGGCCCG
GAAATCGGCA AGAACCTGCT GCGCGCCTCC TATCTGCCGG AAGACGGCGA GACGCCCGCG
GGCTTCGCCG GGGTGTTCGG CATCATCGCG CAACGATACT TCCAGAAATA CGGCGACCAG
TCCGACGCCC TCGCCATGAT CGCCGCCAAG AACCACCACA ACGGAGTGGC CAATCCCTAT
GCGCAGATGC GCAAGGATTT CGGTTTCGAG TTCTGCCGCG CCGAGGGCGA GAAGAACCCG
TTCGTCGCCG GCCCCCTGAA GCGCACCGAC TGCTCGCTCG TCTCCGACGG CGCCGCCGCG
CTGGTGCTGA CTTCGGCGGA GAACGCCAAG ACCATGGGCA AGGCCGTCAA CATCCGCGCC
CGCGCCCATG CGCAGGATTT CCTGCCGATG TCCAAGCGCG ACATCCTGCA GTTCGAAGGC
TGCACCGTCG CCTGGCAGCG CGCGCTGGCC GACGCCGGAA TCACGCTCGA TGATCTCTCC
TTCGTCGAGA CCCACGATTG CTTCACCATC GCCGAACTGA TCGAGTACGA AGCGATGGGG
CTGACCACGA AGGGGCAGGG CGCCCGCGCC ATCAAGGAAG GCTGGACCCA GAAGGACGGC
AAGCTGCCGA TCAATCCGTC CGGCGGCCTC AAGGCCAAGG GCCATCCGAT CGGCGCCACC
GGCGTGTCGA TGCACGTGCT GACCGCGATG CAGCTGCTCG GCCAGGCGCC GGAAGGCATG
CAGATCAAGG ACGCCAAGCT CGGCGGCATC TTCAACATGG GCGGCGCCGC CGTCGCCAAC
TACGTCTCGG TGCTCGAGCC GGCGAAGTAA
 
Protein sequence
MTASIVGWAH MPFGKFDAET VESMIVRVAN EAIADAGIAA GDVDEIVLGH FNAGFSPQDF 
TAALVLQADP ALRFKPATRV ENACATGSAA VHQGIRAIEA GAAKVVLVVG VEQMTRTPGP
EIGKNLLRAS YLPEDGETPA GFAGVFGIIA QRYFQKYGDQ SDALAMIAAK NHHNGVANPY
AQMRKDFGFE FCRAEGEKNP FVAGPLKRTD CSLVSDGAAA LVLTSAENAK TMGKAVNIRA
RAHAQDFLPM SKRDILQFEG CTVAWQRALA DAGITLDDLS FVETHDCFTI AELIEYEAMG
LTTKGQGARA IKEGWTQKDG KLPINPSGGL KAKGHPIGAT GVSMHVLTAM QLLGQAPEGM
QIKDAKLGGI FNMGGAAVAN YVSVLEPAK