Gene RPB_2089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2089 
Symbol 
ID3908503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2375650 
End bp2376339 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content63% 
IMG OID637883982 
Productputative hydroxylase 
Protein accessionYP_485706 
Protein GI86749210 
COG category[S] Function unknown 
COG ID[COG3128] Uncharacterized iron-regulated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0632378 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGTTT GCATTCCCGA TGTGTTGTCC AGGCATGAGG TGGCGGAGTT CCGCCACGTC 
ATGGATGCCG CGGATTGGGA AGACGGCCGT TCCACCGCCG GCGCGCAGTC GGCCATGGTC
AAGCGCAACG AGCAGCTTCC GCCCGACGGC GAGCTCGCCC GTGCGCTCGG CCGTCGCATC
ATCCAGGCGC TGACCGCCAA TCCGAAATTC GTTTCGGCGG CGGTGCCGCT GCAGATCTTC
CCGCCGCTGT TCAACCGCTA TGCCGCGGCG GGCAATCATC ATTTCGGCAT TCACGTCGAC
AACGCGGTGC GCGGCGATCC GCTCACCGGG CTGCGGATCC GTACCGATCT GTCGGTGACG
TTGTTCCTCT CCGAGCCGGA CGAATACGAC GGCGGCGAAC TGGTGATCGA AGACACCTAC
GGCTCGCACG AGATCAAGCT GCCGGCGGGA GATTGCGTGC TGTATCCGTC GACCAGCCTG
CACATGGTCA CGCCGGTCAC GCGCGGTGCG CGGGTCGCGT CTTTTTTCTG GCTGCAGAGC
ATGATACGAG ATGCCCATGC GCGCAGCATG ATCTACGACC TCGACGGGGC CATTCAGGCT
CTCGTCGAGC GGCTGGGACG AGATGACCCT GAAACGGTCA AATTGACCGG TATCTATCAC
AACCTCATCC GCTACTGGGC CGAAGTATGA
 
Protein sequence
MLVCIPDVLS RHEVAEFRHV MDAADWEDGR STAGAQSAMV KRNEQLPPDG ELARALGRRI 
IQALTANPKF VSAAVPLQIF PPLFNRYAAA GNHHFGIHVD NAVRGDPLTG LRIRTDLSVT
LFLSEPDEYD GGELVIEDTY GSHEIKLPAG DCVLYPSTSL HMVTPVTRGA RVASFFWLQS
MIRDAHARSM IYDLDGAIQA LVERLGRDDP ETVKLTGIYH NLIRYWAEV