Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2089 |
Symbol | |
ID | 3908503 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 2375650 |
End bp | 2376339 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637883982 |
Product | putative hydroxylase |
Protein accession | YP_485706 |
Protein GI | 86749210 |
COG category | [S] Function unknown |
COG ID | [COG3128] Uncharacterized iron-regulated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0632378 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGTTT GCATTCCCGA TGTGTTGTCC AGGCATGAGG TGGCGGAGTT CCGCCACGTC ATGGATGCCG CGGATTGGGA AGACGGCCGT TCCACCGCCG GCGCGCAGTC GGCCATGGTC AAGCGCAACG AGCAGCTTCC GCCCGACGGC GAGCTCGCCC GTGCGCTCGG CCGTCGCATC ATCCAGGCGC TGACCGCCAA TCCGAAATTC GTTTCGGCGG CGGTGCCGCT GCAGATCTTC CCGCCGCTGT TCAACCGCTA TGCCGCGGCG GGCAATCATC ATTTCGGCAT TCACGTCGAC AACGCGGTGC GCGGCGATCC GCTCACCGGG CTGCGGATCC GTACCGATCT GTCGGTGACG TTGTTCCTCT CCGAGCCGGA CGAATACGAC GGCGGCGAAC TGGTGATCGA AGACACCTAC GGCTCGCACG AGATCAAGCT GCCGGCGGGA GATTGCGTGC TGTATCCGTC GACCAGCCTG CACATGGTCA CGCCGGTCAC GCGCGGTGCG CGGGTCGCGT CTTTTTTCTG GCTGCAGAGC ATGATACGAG ATGCCCATGC GCGCAGCATG ATCTACGACC TCGACGGGGC CATTCAGGCT CTCGTCGAGC GGCTGGGACG AGATGACCCT GAAACGGTCA AATTGACCGG TATCTATCAC AACCTCATCC GCTACTGGGC CGAAGTATGA
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Protein sequence | MLVCIPDVLS RHEVAEFRHV MDAADWEDGR STAGAQSAMV KRNEQLPPDG ELARALGRRI IQALTANPKF VSAAVPLQIF PPLFNRYAAA GNHHFGIHVD NAVRGDPLTG LRIRTDLSVT LFLSEPDEYD GGELVIEDTY GSHEIKLPAG DCVLYPSTSL HMVTPVTRGA RVASFFWLQS MIRDAHARSM IYDLDGAIQA LVERLGRDDP ETVKLTGIYH NLIRYWAEV
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