| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2078 |
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| Symbol | |
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| ID | 3909893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2361791 |
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| End bp | 2363077 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637883970 |
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| Product | Orn/DAP/Arg decarboxylase 2 |
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| Protein accession | YP_485695 |
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| Protein GI | 86749199 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.192664 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCC CGGCCGCGTT CGATCCCGAT CGGGTCGCGA CGCTCGCCGC GCGCCACGGC
ACGCCGCTGT TCATCTACGA CGCGCCGGCG ATGCGCGCCG CCGCGGCGCG ATTGCAGGAG
GCGCTGCCGC CGGGCGCGCG ATTGTTCTTC GCGGTGAAGG CCAATCCCGC GCCCGATGTG
ATCCGGCTGT TCGCCGGCGA GGGCCTCGGC GCCGAAGTGG CGTCGGGCGG CGAATTGCGG
CTCGCGCTCG CCTGCGGCGT CGCGCCGGAT CGCATCGTGT TCTCCGGCCC GGCGAAGACC
GCGCCGGAGC TGCGCTGCGC GATCGAGGCC TGCATCTTCG CGGTGCAGGC GGAATCCGTC
GCCGAGCTCG ACACGCTGCA GGCGCTGTGC GTCGCGCGCG GCGCGACGGT GCGCGTCGCC
CTGCGCGTCA ATCTCGGGCC GGGCGGCGAA CGCCGCGGCG GCTGGGGCGG GCCTTCGCCG
TTCGGCATGG ATACCGACGC GCTGGACGAG GTCACAGCGC GCGCCGCGCG GCTCGATCGT
CTGCGCATTG TCGGCCTGCA CAATCACCAG GCGTCGCAGA CGCTCGATCC GGCGAAGCTG
ATCGCGCGGT TCGACGCCTT TGCGCGCGTG GCGGCGTCGC TCGGGTCGCG CTTCGATCTG
CAGTTCGTCA ATTTCGGCGG CGGCTTCGGT GCGCCGTTCT ACGCCGACGA CGCGCCGCTC
GATCTCGCGC CGGTCCGCGC GTGTTTCGCC GCGCTCGCCG GCGTGTTCGG CGACCGGCCG
CTGCAGTTCG CCGCCGAATC CGGGCGCTAT CTCGTCGGGC CCGCGGGCTG CTACGTCGCG
CGCGTGGTCG ATGTGAAGCG GTCGTTCGGC GTGCGCTACG CGCTGCTCGA CGGCGGCATT
CATCACGTGC TCGGCCTGTC CGGAACGATG CGGTCGCTGC GCCGGCCGGT GGCGGTGGCG
CGGGTCGGCG CGCGATCGGG GGAGCCTTGC GAGCCGACCG AAATCGCCGG GCCGCTGTGC
ACGCCGATCG ATCGCCTCGC CGGCGCCGCC GAGCTGCCGT GCGATCTCGC CGCCGGCGAC
CTGCTGGCGT TCGCCAATTG CGGAGCCTAT GCCAAGCACG CGAGCCCGCT GAACTTCCTC
GGCCACGACT GGCCGGCCGA ACTGATGATC GACGGCGCGC GCGTCATCGT CCTGTCGCCG
CAAATTGCAT TCGGGCCGGC GCTGTGGCAA TCACGCGAGG TACTCCAGCG ATTTCGATGC
GATGGCAAAA TCCCCACGAG CTCCTGA
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| Protein sequence | MSAPAAFDPD RVATLAARHG TPLFIYDAPA MRAAAARLQE ALPPGARLFF AVKANPAPDV
IRLFAGEGLG AEVASGGELR LALACGVAPD RIVFSGPAKT APELRCAIEA CIFAVQAESV
AELDTLQALC VARGATVRVA LRVNLGPGGE RRGGWGGPSP FGMDTDALDE VTARAARLDR
LRIVGLHNHQ ASQTLDPAKL IARFDAFARV AASLGSRFDL QFVNFGGGFG APFYADDAPL
DLAPVRACFA ALAGVFGDRP LQFAAESGRY LVGPAGCYVA RVVDVKRSFG VRYALLDGGI
HHVLGLSGTM RSLRRPVAVA RVGARSGEPC EPTEIAGPLC TPIDRLAGAA ELPCDLAAGD
LLAFANCGAY AKHASPLNFL GHDWPAELMI DGARVIVLSP QIAFGPALWQ SREVLQRFRC
DGKIPTSS
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