| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2053 |
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| Symbol | |
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| ID | 3909868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 2333748 |
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| End bp | 2335742 |
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| Gene Length | 1995 bp |
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| Protein Length | 664 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637883946 |
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| Product | Fis family transcriptional regulator |
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| Protein accession | YP_485671 |
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| Protein GI | 86749175 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTACGAA ATCTCGTAGT ATACGATTTT TCGGAGTCGA ATTACGAGAT CTCGGAGCAA
GTGGTGGATC TGCCGGTACC CTTTTCCGCA ACCGACACCG ATCTGCGCGC GGAGGCCTTC
GACGGGCTGA TCGAGGCGGC GCTGTTGCTC GATCCGGCCG CCGACCAGAT CCTCGAGGTC
AATCCCGCGG CCTGCGCCCT GCTCGGCTAC GACCGCGCCA CGTTGCTGCA GACCCGGATC
AGCGCGCTGC ACGACCGGCA ATTCCCGGCG CTGATCGTAT TCACCCAGGC GGTGTTCGAC
CGCGGCAGCT ATTGGACCCA CGCGCTGACG CCGAACCATG GCGCCGGCAC GCCATTGCGG
GTCGAATATG CCGGCCGGGC GCTGCAATCT CGCGGGCGCA CACTGCTGCT GCTGACGATG
AGCGACCTCG AGCAGCGCCG CCGCCGCCAT ATCGACGCAG CGGCCGACGA TTACATGCGC
GACGGACTGC CGGCGTGGCA GCGGGTCGAG CGGGTGTTCG AGGATATCGA GCGCGAGAAC
CAGTTGATCC TGCGCGCTGC CGGCGAAGGC ATCTACGGCG TCAACGCCGA GGGCCGCGCC
ACCTTCGTCA ACCCGGCGGC GGAACGGATG CTCGGCTGGT CGGCCGAGGA GCTGGTCGGT
CGGTCGATCC ACGCCGTGAT GCACCACACC CATCACGACG GCCGTCCCTA CGCCGACCAC
GACTGCCCGA TCTACGCCGC GTTCCGCGAC GGCGCGGTGC ACACCGTCGA CGGCGAAGTG
TTCTGGCGCA AGGACGGCAA GCCGGTGTGG GTCGAGTACA CCTCGACGCC GATCCGCGAC
CGCAGCGGCG TGATCGTCGG CGCCGTCGTG GTGTTTCGCG ACGTGAGCCA GCGCCGCGAG
GCCGACGAGA AGCTGCATGC CGCGCTCGCC GAAGTCGACC GGCTGCGCGA GCGGCTGCAG
CTCGAGAACG ATTACTTGCA GGAAGAGATC CGGATCGAGA CCAATCCGCG CGGCATCATC
GGCCAGAGCG AAGCGATCCA GACCACGCTG CGCCAGGTCA AGCTGGTGGC GCCGACCACC
GCCGCGGTGC TGATCACCGG CGAATCCGGC ACCGGCAAGG AACTGATCGC GCGCGCCATC
CACGACGCCA GCACCCGCAG CGGCCGGCCG CTGATCCGGG TCAATTGCGC CGCGATTCCG
CGCGAATTGT TCGAGAGCGA ATTCTTCGGC CACACCCGCG GCGCCTTCAC CGGGGCGGTG
CGCGACCGCA TCGGCCGGTT CGAGCTGGCC GACGGCGGCA CGCTGTTCCT CGACGAGATA
GGCGAGATCC CGCTGGAGCT GCAGGGCAAG CTGCTGCGCG TGCTGCAGGA GGGCAATTTC
GAGCGGGTCG GCGACGAGCG CACCCGCAAT GTCGACGTCC GGCTGATCGC CGCCACCAAT
CGCGACCTGA AGCAGGAGGT GCAGCGCGGC CGTTTCCGCG AGGATCTGTA CTTCCGGCTC
AACGTGTTTC CGATCGAGTC GGTGCCGCTA CGCGATCGCC GCGAGGATAT TCCGTTGCTG
GCGCAGCACT TCCTCGCCAG CGAGCGGCGC GAGCTGAAAT CCGGACTGCG GCTGTCGCAG
GGCGACGTGC GGCGGCTGAT GCGCTACGAG TGGCCGGGGA ACGTCCGCGA ATTGCAGAAC
GTGATCGAGC GCGCCACCAT CCTGGCACAG AACGGGCGGC TGCGGATCGA TTTGCCGGAG
CCGTCCGGCC ACCATCCCGC GCCGAACGCC GGCCGGCAGA AATCCGAAAC GCGACCCGCG
GTGATGACCG CCGCGGAGCT GCGCGATCTC GAGCGCGCCA ACATCGTCGC CGCGCTACGC
GCGTGCAACG GCAAAGTGTT CGGCGACGAC GGCGCAGCGG CGATGCTCGA CCTCAAGCCG
ACGACGCTGG CGTCGCGGAT CAAGGCATTG GGCATCAGCG CGACACGGGC CGCGAACGGC
AGTGCAGTCG ACTGA
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| Protein sequence | MLRNLVVYDF SESNYEISEQ VVDLPVPFSA TDTDLRAEAF DGLIEAALLL DPAADQILEV
NPAACALLGY DRATLLQTRI SALHDRQFPA LIVFTQAVFD RGSYWTHALT PNHGAGTPLR
VEYAGRALQS RGRTLLLLTM SDLEQRRRRH IDAAADDYMR DGLPAWQRVE RVFEDIEREN
QLILRAAGEG IYGVNAEGRA TFVNPAAERM LGWSAEELVG RSIHAVMHHT HHDGRPYADH
DCPIYAAFRD GAVHTVDGEV FWRKDGKPVW VEYTSTPIRD RSGVIVGAVV VFRDVSQRRE
ADEKLHAALA EVDRLRERLQ LENDYLQEEI RIETNPRGII GQSEAIQTTL RQVKLVAPTT
AAVLITGESG TGKELIARAI HDASTRSGRP LIRVNCAAIP RELFESEFFG HTRGAFTGAV
RDRIGRFELA DGGTLFLDEI GEIPLELQGK LLRVLQEGNF ERVGDERTRN VDVRLIAATN
RDLKQEVQRG RFREDLYFRL NVFPIESVPL RDRREDIPLL AQHFLASERR ELKSGLRLSQ
GDVRRLMRYE WPGNVRELQN VIERATILAQ NGRLRIDLPE PSGHHPAPNA GRQKSETRPA
VMTAAELRDL ERANIVAALR ACNGKVFGDD GAAAMLDLKP TTLASRIKAL GISATRAANG
SAVD
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