| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2039 |
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| Symbol | |
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| ID | 3909854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2318718 |
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| End bp | 2319674 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637883932 |
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| Product | HflC protein |
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| Protein accession | YP_485657 |
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| Protein GI | 86749161 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.826229 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACCG GAATCGCAGG TATCGTCGCC CTGATCGTCC TCCTGGTCGC GATCATCGTC
GGTTGGTCGT CGCTGTTCAC CGTCCGCCAG ACCGAGCAGG TGCTGCTCGT CCGGCTCGGC
GAGCCGGTGC GCGTCGTCAC TGAACCGGGC CTGCATTTCA AGGCGCCGTT CATCGACACC
GTGATCAGCA TCGACAAGCG GATTCTCGAT CTCGAAAATC CGTCTCAGGA AGTCATCGCG
TCCGATCAGA AGCGGCTCGT GGTCGATGCG TTCGCGCGCT ATCGCATCAA CAATGCGCTG
CGCTTCTACC AGAGCATCGG GTCGATCCCG GCCGCGAACA TCCAGCTCAC GACGCTGTTG
AACTCGGCGC TGCGCCGCGT GCTCGGCGAG GTCACCTTCA TTCAGGTGGT GCGCGACGAG
CGTGAGGGCT TGATGCAGCG GATTCGTGCC CAGCTCGACC GCGAGGCGGA AGGCTACGGC
ATTCAGGTCA TCGACGTGCG TATCCGCCGT GCCGATCTGC CGGAGCAGAA CAGCCAGGCG
GTGTATCAGC GGATGCAGAC CGAACGTCAG CGCGAGGCCG CCGAGTTCCG CGCTCAGGGT
GCCCAGAAGG CCCAGGAGAT CCGTTCGAGG GCCGACCGCG AGGCGACCGT GATCGTCGCC
GAGGCGAATT CGCAGGCCGA AGAAATCCGC GGTTCGGGCG ACGCCGAGCG TAACCGCCTG
TTCGCGGCCG CCTACGGCAA GGACCCGGAA TTCTTCTCGT TCTATCGGTC GATGACGGCC
TATGATCAGT CGCTGAAGAG CTCGGACACC CGCTTCCTGC TGCGGCCCGA TTCGGAGTTC
TTCCGCTTCT TCGCCAATTC GTCCGGCAGG CCTGCGATAC GGCCGGCGAC TGCGGCGGCT
CCCGCGCCGG GCGGGACGGG GCAGGCAATG CCTGAACCGG CCGCCGCGCC GCGCTAG
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| Protein sequence | MKTGIAGIVA LIVLLVAIIV GWSSLFTVRQ TEQVLLVRLG EPVRVVTEPG LHFKAPFIDT
VISIDKRILD LENPSQEVIA SDQKRLVVDA FARYRINNAL RFYQSIGSIP AANIQLTTLL
NSALRRVLGE VTFIQVVRDE REGLMQRIRA QLDREAEGYG IQVIDVRIRR ADLPEQNSQA
VYQRMQTERQ REAAEFRAQG AQKAQEIRSR ADREATVIVA EANSQAEEIR GSGDAERNRL
FAAAYGKDPE FFSFYRSMTA YDQSLKSSDT RFLLRPDSEF FRFFANSSGR PAIRPATAAA
PAPGGTGQAM PEPAAAPR
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