Gene RPB_2031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2031 
Symbol 
ID3909845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2311158 
End bp2311682 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content65% 
IMG OID637883925 
Producthypothetical protein 
Protein accessionYP_485650 
Protein GI86749154 
COG category[S] Function unknown 
COG ID[COG3814] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.72868 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.191022 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCG ATCACATCCG ATACGACGTC CTCGCGCGCG AAGCCTTGCG CGGCGTGCTG 
CGGCAGGTCC TGACCGACGT CGCTCAGCAC GGCCTGCCCG GCGAGCACCA CTTCTTCATC
ACCTTCCTGT CCAAGGCCGA TGGCGTGAAG CTGTCGCCAC GGCTGCTGGC GCAATATCCG
GAGGAGATGA CCGTCATCCT CCAGCATCAA TTCTGGGATC TGGTGGTGAC CGAGGATCGT
TTCGAGGTCG GGCTGTCGTT CGGCGGCATT CCGGAGCGGC TGGTGGTGCC GTTTTCGTCG
ATCAAGAGCT TCTTCGATCC GTCGGTGCAG TTCGGCCTGC AATTCGAAGC CGGTGACGGC
GCCGCTGAAG CTGCCGACAC CGACGCCCCG GAGATCGCCC CCCCGGCTCC GAGCCCGGCT
TTGCCCGCCG CGGCCGATTC CGGGCCTGCC GAAATTGCCG CCGACGAGGC GGTCAAATCC
GAAGGCGCCG AAGTGGTGCG GCTCGATCGC TTCCGCAAGA AATAG
 
Protein sequence
MATDHIRYDV LAREALRGVL RQVLTDVAQH GLPGEHHFFI TFLSKADGVK LSPRLLAQYP 
EEMTVILQHQ FWDLVVTEDR FEVGLSFGGI PERLVVPFSS IKSFFDPSVQ FGLQFEAGDG
AAEAADTDAP EIAPPAPSPA LPAAADSGPA EIAADEAVKS EGAEVVRLDR FRKK