| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2023 |
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| Symbol | |
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| ID | 3909529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 2299877 |
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| End bp | 2302414 |
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| Gene Length | 2538 bp |
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| Protein Length | 845 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637883917 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_485642 |
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| Protein GI | 86749146 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.184337 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAC CGAACAAGCG CGCCAATCCC GACCTCTCCG GCTATCAGCC CGCCGCCGGC
GGCATCGCCG CGCGGGCGCG CGCCTCCGCG GCGCCGGCCT ATCTGTCGGG GCTCAATCCG
GAGCAGCGCG AGGCGGTCGA GACGCTGGAC GGCCCGGTGC TGGTGCTGGC CGGCGCGGGC
ACCGGCAAGA CCCGGGTGCT GACGACGCGG ATCGCCCACA TCCTCTCCAC CGGCCGCGCC
CGCCCCGCCG AGATCCTGTC GGTGACCTTC ACCAACAAGG CCGCGCGCGA GATGAAGCTG
CGGCTGGGGC AGATGCTCGG CCAGGCGGTC GAGGGCATGC CGTGGCTCGG CACCTTCCAT
TCCATCGGCG GCCGCATCCT GCGCTATCAC GCCGAACTGG TGCAGCTCAC CTCGAACTTC
ACCGTGCTCG ACACCGACGA CCAGATAAGG CTGCTGAAGC AGCTCCTCGC CGCCGACAAT
ATCGACGACA AGCGCTGGCC GGCGCGGATG CTGGCCGGGC TGATCGACGG CTGGAAGAAC
CGCGGCCTGA CGCCGTCGCA GGTGCCCGCC GGCGAAGCCG CGAGCTTCGG CAACGGCCGC
GGCGGCAAGC TCTACGCCGC CTATCAGGAG CGGCTGAAAG TGCTGAACGC CGCCGATTTC
GGCGATCTGC TGCTGGAGAA CATAAGGCTG TTCCGCGAGC ACCCCGACGT GCTGCGGCAA
TATCAAAGCC GCTTCAAGTT CATCCTGGTC GACGAGTATC AGGACACGAA CGTCGCGCAG
TATCTCTGGC TGCGGCTGCT GTCGCAGGCG CCGTCGTCCT CCTCGTCGTC ATTGCCGGGC
TTGACCCGGC AATCCATCAT TTCTCAAGAA GATGGATCAC CGGGTCGCGA CGCTTCGCGT
CGGCCCGGTG ATGACGACAG AACAAGCGGC GATGTCGCTG CGCCTTCCTC GCCCCCCAAA
AACATCTGCT GCGTCGGCGA CGACGATCAG TCGATCTATG GCTGGCGCGG TGCCGAGGTC
GACAACATCC TGCGCTTCGA CCACGATTTC CCCGGCGCCA AGGTCATTCG CCTCGAACGC
AATTATCGCT CGACCGGCCA CATCCTCGCC GCCGCCTCGC ATCTGATCGC CCATAACGAA
GGCCGGCTCG GCAAGACGCT GCGCACCGAG GACGTCGACG GCGAGATGGT CACCGTCACC
GGCGCGTGGG ACTCCGAGGA AGAAGCCCGA GGCATCGGCG AGGAGATCGA GCAGCTGCAG
CGCCAGGGCC ACAAGCTCAA CGAGATCGCC ATCCTGGTGC GCGCCTCGTT CCAGATGCGC
GAATTCGAAG ACCGCTTCGT CACCCTCGGC CTGCCCTATC GCGTCATCGG CGGTCCGCGG
TTCTACGAGC GCGCCGAAAT CCGCGACGCG CTGGCGTATC TGCGCGTGAT CAATTCGCCG
GCCGACGATC TCGCCTTCGA GCGCATCGTC AACGTGCCGA AGCGCGGCCT CGGCGACGCC
ACCGTGCAGC TCTTGCACGA CCACGCCCGC AAGCGCCGCA TTCCGCTGTT CGAAGCGTCG
CGGCTGGTGG TCGAGACCGA CGAGCTGAAG CCGAAGGCGC GCAGTTCGCT GCGCGGGCTG
ATCGAGAATT TCGAGCGCTG GCAGGTGCAG CGCAACGCGC TGTCGCATAC CGAACTCGCC
GAGATCGTGC TCGACGAGAG CGGCTACACC GAGATGTGGC AGAAGGACCG CTCCGCCGAC
GCCGCCGGCC GGCTGGAGAA CCTGAAGGAA CTCGTCCGCT CGATGGAGGA GTTCGAGAAC
CTGCAAGGAT TTCTCGAACA CATCTCGCTG GTGATGGACC GCGACGGCGC CGCCGACGAG
GACGCCGTCA GCGTGATGAC GCTGCATTCC GCCAAGGGCC TGGAATTCGA GACGGTGTTC
CTGCCCGGCT GGGAGGAAGG CCTGTTTCCA CATCAGCGCG CGCTCGACGA TCAGGGCCGC
GCCGGGCTGG AAGAAGAACG CCGCCTCGCC CATGTCGGCA TTACGCGGGC GAGGCGCCGG
GCGAAGTTGT ACTTCGCCAC CAACCGCCGC ATCCACGGCA CCTGGAACAC CACGATCCCG
TCGCGCTTTC TCGACGAACT GCCGCAGGCC AATGTCGAGA TCACCGAGTC GAAAGGCGGC
TCCGGCTGGG GCGGCATGAG CGGCTACGGC CCGTCGCGCT TCGACAATGT CGAATCGTTC
GGCTCCAGCT ACTCGACGCC GGGCTGGCAG CGCGCCCAGG CGCAACGTAA AAACGGCGGC
GGCCGCAGCG GCGGCGGCGG TTTCAGCGAA AGCGGCGCGT CCTACTCATC CAGCCCCCGC
CGCGCCCCGT TCACCATCGA AGGCGAACTG GTCGCCAAAT CCACCGGCAC CGACTCCGAC
TTCACCGTCA GCGACCGGGT GTTTCATCAA AAGTTCGGCT ACGGCCAAGT GACGAAAATC
GACGGCAACA AGCTCACCAT CGCCTTCGAC AAGGCCGGCG AAAAGAAGGT GGTCGATAGT
TTCGTGCAGC GGGTGTAG
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| Protein sequence | MTEPNKRANP DLSGYQPAAG GIAARARASA APAYLSGLNP EQREAVETLD GPVLVLAGAG
TGKTRVLTTR IAHILSTGRA RPAEILSVTF TNKAAREMKL RLGQMLGQAV EGMPWLGTFH
SIGGRILRYH AELVQLTSNF TVLDTDDQIR LLKQLLAADN IDDKRWPARM LAGLIDGWKN
RGLTPSQVPA GEAASFGNGR GGKLYAAYQE RLKVLNAADF GDLLLENIRL FREHPDVLRQ
YQSRFKFILV DEYQDTNVAQ YLWLRLLSQA PSSSSSSLPG LTRQSIISQE DGSPGRDASR
RPGDDDRTSG DVAAPSSPPK NICCVGDDDQ SIYGWRGAEV DNILRFDHDF PGAKVIRLER
NYRSTGHILA AASHLIAHNE GRLGKTLRTE DVDGEMVTVT GAWDSEEEAR GIGEEIEQLQ
RQGHKLNEIA ILVRASFQMR EFEDRFVTLG LPYRVIGGPR FYERAEIRDA LAYLRVINSP
ADDLAFERIV NVPKRGLGDA TVQLLHDHAR KRRIPLFEAS RLVVETDELK PKARSSLRGL
IENFERWQVQ RNALSHTELA EIVLDESGYT EMWQKDRSAD AAGRLENLKE LVRSMEEFEN
LQGFLEHISL VMDRDGAADE DAVSVMTLHS AKGLEFETVF LPGWEEGLFP HQRALDDQGR
AGLEEERRLA HVGITRARRR AKLYFATNRR IHGTWNTTIP SRFLDELPQA NVEITESKGG
SGWGGMSGYG PSRFDNVESF GSSYSTPGWQ RAQAQRKNGG GRSGGGGFSE SGASYSSSPR
RAPFTIEGEL VAKSTGTDSD FTVSDRVFHQ KFGYGQVTKI DGNKLTIAFD KAGEKKVVDS
FVQRV
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