Gene RPB_2022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2022 
Symbol 
ID3909528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2299575 
End bp2299868 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content64% 
IMG OID637883916 
Producthypothetical protein 
Protein accessionYP_485641 
Protein GI86749145 
COG category[S] Function unknown 
COG ID[COG1598] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.125312 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCACT ACGTCGCCTT GATCCACCAG GACGCTGACG GCAGCTACAG CGTGTCGTTT 
CCCGATATCC CCGGGGTCGT CACCGCCGGC GAGACGCTGG AAGAGGCGAA GGAAGAAGCC
GCCGAGGTGC TCGTCTTCGC GGCCGAGGAT TGGACCAACC CGGATGGCTC GACCGTGTTC
AATCCGCCAC GCACGATCGA CGAGTTGCGC AAAGACCCCG CCTTCGTCGA AGACAGCAAG
GACGCAATCG TCGCCCTGAT CGAATACCCC GCCCGTGCCC ACGCGGCGGA ATAG
 
Protein sequence
MVHYVALIHQ DADGSYSVSF PDIPGVVTAG ETLEEAKEEA AEVLVFAAED WTNPDGSTVF 
NPPRTIDELR KDPAFVEDSK DAIVALIEYP ARAHAAE