Gene RPB_2020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2020 
Symbol 
ID3909526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2298946 
End bp2299236 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content64% 
IMG OID637883914 
Producthypothetical protein 
Protein accessionYP_485639 
Protein GI86749143 
COG category[S] Function unknown 
COG ID[COG1598] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.125942 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCACT ACATCGCCAT CATCGAAGAA GCCGGACCGG AATTCGCGGT CGGTGTCTGG 
TTTCCCGATC TGCCGGGCTG CGTCTCGGCG GGCGATGATG TCGACGAGGC GTTGCGCAAT
GCGCCCGAGG CGCTGGCGCT ATATCTCGAA GAGGTCGAGC AAGAGGGCAA ACCGCTGCCG
AAGCCGCGCA CGCTGACCGA GTTGAAGGCC GATCCCGAAG CGGCCGAGGA CATCCGGAAT
TACATCGTCG CCCTGATCGA ATACCCCGCC CGCGCCCACG CGGCCGAATA G
 
Protein sequence
MTHYIAIIEE AGPEFAVGVW FPDLPGCVSA GDDVDEALRN APEALALYLE EVEQEGKPLP 
KPRTLTELKA DPEAAEDIRN YIVALIEYPA RAHAAE