Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2014 |
Symbol | |
ID | 3909520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 2291381 |
End bp | 2293039 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637883908 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_485633 |
Protein GI | 86749137 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.166375 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.451875 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCGCCG CGGCGCAGGA GCCGCCGCCC GCCCCTCCTG GAACAGCCAT GTCCGATTCC GACGTGCTGA TCATCGGCGC CGGTCACAAC GGCCTCACCT GCGCCGCCTA TCTGGCGCAG GCCGGGCTGA CGGTGAAGGT CGTCGAGCGC CGCAGCGTGG TCGGCGGCGC CGCGGTGACT CAGGAATTTC ATCCCGGCTT CCGCAATTCG GTCGCGGCCT ACACCGTCAG CCTGCTCAAC CCCAAGGTGA TCGCCGACCT GAAGCTCGCC GAGCACGGGC TGCGCATCGT CGAGCGCCGG GCGCAGAACT TCCTGCCCGA CCCGAACGGC AAATATCTGC TGACCGGGGC CAAATACACT GCCAGATCGG TGGCGCATCT CAGCAAGCCC GACGCCGGCA AGATCGACGG TTTCACCGCC GAGTTGGAGA CCATCGCCGA CGTGCTGCGG CATTTCGTGC TGCGGGCGCC GCCCAATCTG GTCGAGCGCT TCGGCGTCGG CGCCGTTCGC GAGGGCCTCG CCGCGCTCGG CGCCGCCAAC CGGCTGCGCG CGCTGACGCT GGAGCAGCAG CGGCTGCTGC TCGATCTGTT CACCTGCTCG GCCGGTGAGA TGCTCGACGC GCGGTTCGAG CACGATCTGG TCAAGGCGCT GTTCGGCTTC GACGCCATCG TCGGCAATTA CGCCAGCCCC TACGCCGCCG GCTCCGCCTA CGTCATGCTG CACCACGCCT TCGGCGAGGT GAACGGCAGG AAGGGCGTCT GGGGCCATGC GGTCGGCGGG ATGGGGGCGA TTTCGCAAGC CATGGCCGCC GCAGCCCGCG CCGCCGGTGC CGAGATCGAA ACCTCGGCCG GCGTCCGCGA GGTGCTGGTC GAGAAGGACC GGGTGGTCGG CGTCACGCTC GACGACGGCC GCGGCCTGCG GGCGAAATAC GTCGCCGCCA ACGTCAATCC GAAGCTGCTC TACACCAGGC TGCTACCGAA GGATGCGCTG CCGGGGGATG TCCACCGCCG CATGACCGCG TGGAAGAACG GCTCCGGCAC CTTCCGCATG AATGTCGCGT TGGCCGGCCT GCCCTCGTTC ACGGCGCTGC CCGGCACCGG CGACCATCTC ACCGCCGGCA TCATCATCGC CCCCGGCCTC GATTACATGG ACCGCGCCTG GAGCGACGCA CGCGCGCACG GCTGGAGCCG CGAGCCGGTG GTCGAGATGC TGATCCCATC GACGCTGGAC GAATCCCTGG CCCCGCCCGG CCGGCACGTC GCCAGCCTGT TCTGCCAGCA CGTCGCGCCG CAACTGCCCG GTGGCGTGTC CTGGGACGAC CGCCGCGACG AGGTCGCCGA TCTAATGATC GCCACCGTCG ACCGCTACGC CCCCGGCTTC GCCGCCAGCG TGCTCGGCCG CCAGATCCTG TCGCCGCTCG ATCTCGAGCG CGATTTCGGC CTGCTCGGCG GCGACATTTT TCACGGCGCG CTGAGCCTGA ACCAGCTGTT CTCGGCCCGG CCGATGCTCG GCCATGCCGA CTACCGCGGG CCGCTGAAGG GCCTCTACCA CTGCGGTAGC GGCGCCCATC CCGGCGGCGG GGTCACCGGC GCCCCCGGCC ACAACGCCGC AGCCGCGATC CTCAACGATC ACCGCAGCCT GTTCACAAAG CGTGGATAA
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Protein sequence | MAAAAQEPPP APPGTAMSDS DVLIIGAGHN GLTCAAYLAQ AGLTVKVVER RSVVGGAAVT QEFHPGFRNS VAAYTVSLLN PKVIADLKLA EHGLRIVERR AQNFLPDPNG KYLLTGAKYT ARSVAHLSKP DAGKIDGFTA ELETIADVLR HFVLRAPPNL VERFGVGAVR EGLAALGAAN RLRALTLEQQ RLLLDLFTCS AGEMLDARFE HDLVKALFGF DAIVGNYASP YAAGSAYVML HHAFGEVNGR KGVWGHAVGG MGAISQAMAA AARAAGAEIE TSAGVREVLV EKDRVVGVTL DDGRGLRAKY VAANVNPKLL YTRLLPKDAL PGDVHRRMTA WKNGSGTFRM NVALAGLPSF TALPGTGDHL TAGIIIAPGL DYMDRAWSDA RAHGWSREPV VEMLIPSTLD ESLAPPGRHV ASLFCQHVAP QLPGGVSWDD RRDEVADLMI ATVDRYAPGF AASVLGRQIL SPLDLERDFG LLGGDIFHGA LSLNQLFSAR PMLGHADYRG PLKGLYHCGS GAHPGGGVTG APGHNAAAAI LNDHRSLFTK RG
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