Gene RPB_2004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2004 
Symbol 
ID3909510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2277123 
End bp2278916 
Gene Length1794 bp 
Protein Length597 aa 
Translation table11 
GC content70% 
IMG OID637883898 
Productcell division protein FtsZ 
Protein accessionYP_485623 
Protein GI86749127 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0206] Cell division GTPase 
TIGRFAM ID[TIGR00065] cell division protein FtsZ
[TIGR03483] cell division protein FtsZ, alphaProteobacterial C-terminal extension 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.298941 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCA ATCTCAACGT TCCCGACATT CGCGAGCTGC GGCCCCGGAT CACCGTGTTC 
GGAGTCGGCG GCGCCGGCGG CAATGCGGTC AACAACATGA TCACCGCCGG GCTGGATGGC
GTCGACTTCG TCGTCGCCAA CACCGACGCG CAGGCGCTGA CGATGTCGAA GGCGCAGCGG
CTGATCCAGA TGGGCACCCA GGTGACCCAG GGTCTCGGCG CCGGCTCGCA GCCCGATGTC
GGCTCCGCCG CGGCGCAGGA AGTCATCGAC GAGATTCGCG ATCACCTCAC CGGCGCCAAC
ATGGTGTTCG TCACCGCCGG CATGGGCGGC GGCACCGGCA CCGGCGCGGC GCCGGTGATC
GCCAAGGCCG CCCGCGAGAT GGGTATCCTC ACCGTCGGCG TGGTCACCAA GCCGTTCCAC
TTCGAGGGCG CCCGCCGGAT GCGGACCGCC GAGTCCGGCA TCACCGAACT GCACAAGGTG
GTCGACACTC TCCTGATCAT CCCGAACCAG AACCTGTTCC GCGTCGCCAA CGAGAAGACC
ACCTTCGCCG ACGCCTTCGC GATGGCCGAC CAGGTGCTGT ATTCGGGCGT CGCCTGCATC
ACCGACCTGA TGGTGAAAGA AGGCCTGATC AACCTCGACT TCGCCGACGT CCGCGCGGTG
ATGCGCGAGA TGGGCAAGGC GATGATGGGC ACCGGCGAAG CCTCCGGCGA GAAGCGCGCG
TTGACCGCCG CCGAAGCCGC GATCGCCAAT CCGCTGATCG ACGACTCGTC GATGAAGGGT
GCGCGCGGCC TGCTGATCTC GATCACCGGC GGCAAGGACC TGACGCTGTT CGAAGTCGAC
GAAGCCGCCA CCCGCATCCG CGAGGAGGTC GATCAGGACG CCAATATCAT CGTCGGCGCC
ACCTTCGACG AGAGCCTCGA CGGCATCATT CGCGTCTCGG TCGTGGCCAC CGGCATCGAG
CAGGCGCAGT TGTCGCGGAA CGCAGCCGCG GCCGGCGCGG CTGCCAATGC TGCGCCGGCT
GACAGCCGTC TGGCTGAACT GACCGCCAAG CTGCGCGCCG ACAATCTGCG CATCGCGGAA
GCCGCCGCCG CCCGCGCGGC GCAGGCTGCC GCTGCGCCGG CTCCGGCCGC CGCTGCCCCG
GTGGCCCGCG CCGCCAATGT CGAGCGTGCG GCGCTCGCCG CGATCGCTGC CGCCGTCAGT
AACGAGCAGA TGCCGGCTCA GGACGTCGCT CAGGCGCCGG TGCAGTCCGC GTCCTATGGC
GACGTCACCG TCCGTCCGAT CCCGCAGAAG CCGTCGCTGT TCCCCGACGT CGAGCCGACG
CGCGCGACGC ACGAGGAGCC CGAGACTCCG GACGCCTTCA TTCCGCAGCA GCCCGACCGG
GCCGCTCTGC GCGCGCCGCG GATGCCGCGG TTCGACGAAT TGCCGGTGCC CGCCCAGAAC
GAGATCCGTC AGGCCGCCCG CAGCGAGTTC GACGACGAGC CGCAGAAGAC CCGGCTGTCG
CTGCTGCAGC GTCTCGCCAA CGGCCTCAGC CGTCGCGAAG ACGAAGCCGA GCCCGCGGCT
CCGGCGCGCG GCGTCGCCGC GCCCGCAATG CCGCAGATGC CGCCCCTGCC GGAACGCCGC
CCGCAGCGCA GCGTCGCCGA GCAAATGGGC GGCCCGGACC CGGTGTCGGA ATACGCCAAA
CGCCCGGCGC CGCAGGGCCT CGACATCCAT GGGCGGCCCG CACCTGTTGC GCCCCTGCCA
CAGGGGGACG ACCATCTGGA TATCCCCGCC TTCCTGCGGC GGCAGGCGAA CTGA
 
Protein sequence
MTINLNVPDI RELRPRITVF GVGGAGGNAV NNMITAGLDG VDFVVANTDA QALTMSKAQR 
LIQMGTQVTQ GLGAGSQPDV GSAAAQEVID EIRDHLTGAN MVFVTAGMGG GTGTGAAPVI
AKAAREMGIL TVGVVTKPFH FEGARRMRTA ESGITELHKV VDTLLIIPNQ NLFRVANEKT
TFADAFAMAD QVLYSGVACI TDLMVKEGLI NLDFADVRAV MREMGKAMMG TGEASGEKRA
LTAAEAAIAN PLIDDSSMKG ARGLLISITG GKDLTLFEVD EAATRIREEV DQDANIIVGA
TFDESLDGII RVSVVATGIE QAQLSRNAAA AGAAANAAPA DSRLAELTAK LRADNLRIAE
AAAARAAQAA AAPAPAAAAP VARAANVERA ALAAIAAAVS NEQMPAQDVA QAPVQSASYG
DVTVRPIPQK PSLFPDVEPT RATHEEPETP DAFIPQQPDR AALRAPRMPR FDELPVPAQN
EIRQAARSEF DDEPQKTRLS LLQRLANGLS RREDEAEPAA PARGVAAPAM PQMPPLPERR
PQRSVAEQMG GPDPVSEYAK RPAPQGLDIH GRPAPVAPLP QGDDHLDIPA FLRRQAN