Gene RPB_1988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1988 
Symbol 
ID3909494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2257126 
End bp2258880 
Gene Length1755 bp 
Protein Length584 aa 
Translation table11 
GC content66% 
IMG OID637883882 
Productpeptidoglycan glycosyltransferase 
Protein accessionYP_485607 
Protein GI86749111 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.391079 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAC CGTCGGTGCC GCTCGTCGGC CATCACGTCA ATTGGCGCCA GCGGCTGGTG 
CGCAGCCTGA TCTACGGCCG CGACGTCGAT CGCGACGCCA AGGCGCGCGC CCGCGTCGGT
CTGGCGATGC TGGCCTTCGC CGCGGTCTAT GGCGTGATCG CGTTCAAGCT GACCTTCATC
GCGGTGGTCG GCGACAGCCA CGGCACGCGG CGCACCGCGT CGCAGGACGC GATCGCCACC
GCGCGGCCCG ACATCGTCGA CCGCAACGGC ACCATCCTGG CCACCGACGT CAAATCGCCG
TCGCTGTTCG GCGAGCCGCG CCGCATCATC GATCAGGATG AAGCGGTCGA ATTGCTCACC
GCGACGCTGC CGGACCTCGA GACCCCGGAG GTCCGCGAGC GGCTGGCCTC GAAGAAGGGC
TTCGTCTGGC TGAAGCGAGA GATCACGCCG CGGCAGCAGG CCGACATCAA GAAGCTCGGT
ATTCCCGGCA TCGGCTTCCT GCGCGAGAAC AGGCGCATCT ACCCCACCGG CACCGAGGTC
TCGCACCTCA TCGGCCTCGT CAATATCGAC AACCAGGGCA TCGCCGGCAT CGAGAAGTGG
CTCGACCACA ACGGACTCGC CGATCTGCAT CGCGCCGGCT TCGCCTCCGA CCGGCTGCAG
AAGCCGGTGG AGCTCGCGGT CGACATCCGC GTCCAGCACG CGCTGCGCGA TGAATTGCTG
AAGGCGAAGG ACAAGTACAA GGCCAAGGCG GCGTCCGGTC TCGTCTCCAA CGTCAACACC
GGCGAGATCG TCGCGATGGT GTCGCTGCCG GATTTCGATC CGAACAATCC GCGCGAGGCC
AACGACCCGG ACCGCATCAA CCGGCTCACC ACCGGCGTCT ACGAGATGGG CTCGACCTTC
AAGACGCTGA CGCTGGCGAT GGCGCTCGAC TCGGGCAAGG CGACGCTGAA TTCGATGTAC
GACGCCCGCG GCGCGTTGCG CTACGGCAAG TTCGCGATCC ACGACACCCA TCCGCTCGGC
CGCGCGATCT CGCTGTCGGA AGTGTTCACC TTCTCGTCCA ACGTCGGCGC TGCACGGATC
GCGCTGTCGA TGGGCGTCGA CGCGCACAAG GCGTTCCTCA AGAAGGTCGG CCAGCTCGAC
CGGCTGCGCA CCGAACTGCC CGAGAGTGCC TCGCCGATCG TGCCGAAGCG CTGGGGCGAA
CTCAACACCA TCACCATCTC GTTCGGCCAC GGCGTCGCGG TGGCGCCGCT GCAGGCGGTG
ATGGGCATCA ACGCGATGGT CAATGGCGGC TATCTGATCC CACCGACCTT CCACCGGCGC
AGCGAAGACG AAGCGCAGAA GATGGCCAAG CGCGTGGTCA AGAAGGAGAC CAGCGACAAG
ATCCGCTATC TGATGCGCCT GAACGCCGAA ATCGGCACCG CCAGGACGGC GGATCAGATC
GCCAAGGGCT ACTACATCGG TGGCAAGACC GGAACCTCGG AAAAGGTGAT CAACGGCCGC
TACGCCAAGA AGCAGGTGTT GAACTCGTTC ACCGCCGTGC TGCCGGCCGA CCATCCGCAA
TTCCAGGTGC TGATCATGCT CGACGAGCCC AAGCCGCTGC CGGAAACCCA CGGCTTCATC
ACCTCGGGCT GGAACGCGGT GCCCACCGGT GGCAAGGTGA TCGAGCGAAT CGCGCCGCTG
CTGGGGATCG AGCCGCGGTT CGATCTGCCG CCGCCCGACC GCCTCATTCT TGCGTCATCG
AGGGCGGCCC AGTAG
 
Protein sequence
MTEPSVPLVG HHVNWRQRLV RSLIYGRDVD RDAKARARVG LAMLAFAAVY GVIAFKLTFI 
AVVGDSHGTR RTASQDAIAT ARPDIVDRNG TILATDVKSP SLFGEPRRII DQDEAVELLT
ATLPDLETPE VRERLASKKG FVWLKREITP RQQADIKKLG IPGIGFLREN RRIYPTGTEV
SHLIGLVNID NQGIAGIEKW LDHNGLADLH RAGFASDRLQ KPVELAVDIR VQHALRDELL
KAKDKYKAKA ASGLVSNVNT GEIVAMVSLP DFDPNNPREA NDPDRINRLT TGVYEMGSTF
KTLTLAMALD SGKATLNSMY DARGALRYGK FAIHDTHPLG RAISLSEVFT FSSNVGAARI
ALSMGVDAHK AFLKKVGQLD RLRTELPESA SPIVPKRWGE LNTITISFGH GVAVAPLQAV
MGINAMVNGG YLIPPTFHRR SEDEAQKMAK RVVKKETSDK IRYLMRLNAE IGTARTADQI
AKGYYIGGKT GTSEKVINGR YAKKQVLNSF TAVLPADHPQ FQVLIMLDEP KPLPETHGFI
TSGWNAVPTG GKVIERIAPL LGIEPRFDLP PPDRLILASS RAAQ