| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1981 |
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| Symbol | |
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| ID | 3909486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2250567 |
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| End bp | 2252153 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637883875 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_485600 |
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| Protein GI | 86749104 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0426587 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGCAT CCACCACAGC GACCGCCGGA GCGGTGCCGC AGGCGCCGTC CGAACACGTG
CCGGCCAGCC GGCTGATCGC GTTCCTGATC ATGGTGTTCG GGATGTTCAT GTCGATCCTG
GACATCCAGA TCGTCTCGGC ATCGCTGTCC GAAATCCAGG CCGGCCTGTC GGCGTCATCG
TCCGAAGTCT CCTGGGTGCA GACCTCGTAT CTGATCGCCG AAGTGATCGC GATCCCGCTG
TCCGGCTTCC TGTCGCGCGC GCTCGGCACG CGCAATCTGT TCGCGATCTC GGCGGCCGGC
TTCACCTTCG CCAGCCTGAT GTGCGGTCTC ACCTCGTCGA TCACCGAGAT GATCGTGTGG
CGGGCGATCC AGGGCTTCCT CGGCGCCGGC ATGATCCCGA CCGTGTTCGC CTCGGCCTAC
ACGGTGTTTC CGCGCAGCAA ATTCAACCTG GTCGGGCCGA TCATCGGCCT GGTGGCGACG
CTGGCGCCGA CCATCGGCCC GACGGTCGGC GGCTACATCA CCGACCTGAT GTCGTGGCAC
TGGCTGTTCT TCATCAACGT CGTCCCCGGC ATCGGCATCA CCATCGGCGT GCTGATGCTG
GTCGATTTCG ACGAGCCGCA TTACGAACTG CTCGACCATT TCGACTGGTG GGGGCTGCTG
TTCATGGCGG GCTTCCTCGG CTCGCTCGAA TACGTGCTCG AGGAAGGCCA TCGCAACGAC
TGGTTCAGCG ACGAGTCGAT CTTCATCTTC GCGATCGTCT GTGCGGTCTG CGCCGTGGGG
TTCTTCTGGC GGGTGCTGAC CGCGCGCGAG CCGATCGTCG ACATCCGTGC CTTCACCAAC
CGCAATTTCG CGTTCGGTTG CCTGTTCTCG TTCTGCGTCG GTATCGGCCT GTACGGCCTG
ACCTACATCT ATCCGCGCTA CCTCGCCGAA GTCCGCGGCT ACAGCGCGCT GATGATCGGC
GAGACGATGT TCGTCTCCGG CATCGCGATG TTTCTGTCCG CGCCGCTGGT CGGCCGGCTG
ATGACGCTGG TCGACATGCG CATCCTGATC GCGATCGGCC TTTTGCTGTT CGCCGCCGGC
ACCTGGCTGA TGACCGGGAT CACCCGCGAC TATGATTTCT ACGAGCTGCT GTGGCCGCAG
ATCTTCCGCG GCGTCGGCAT GATGATGGCG ATGGTGCCGG TCAACAACAT CGCGCTCGGC
ACGCTGCCGC CGGAGCGCGT CAAGAACGCC TCCGGCCTGT TCAACCTGAC GCGCAATCTC
GGCGGCGCGC TCGGGCTGGC GCTGATCAAC ACCATCCTCG ACGGCCGCAC CGATTTCCAC
ATCTCGCGGC TGCACGACAA GGTGAATTGG GGCAACGCCC AGGCGGTCGA CTTCCTCAAC
ATGCTGACGC AGAAATTCCA GGGCATGGGC GACGCCTCGC TGATGGCGCT GAAGCAGTTC
AACCAAATCG TCCACCGCCA GGCCGTCACC ATGAGCTTCG GCGACGCGTT CTTCCTGCTG
ACGATCTTCT ACGTTGGGCT CAGCACGCTG GTGGTGCTGG TGGCGAAACC GGCGAACCCG
GCGGCAGCGG GGGGCGGGGG GCATTAG
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| Protein sequence | MSASTTATAG AVPQAPSEHV PASRLIAFLI MVFGMFMSIL DIQIVSASLS EIQAGLSASS
SEVSWVQTSY LIAEVIAIPL SGFLSRALGT RNLFAISAAG FTFASLMCGL TSSITEMIVW
RAIQGFLGAG MIPTVFASAY TVFPRSKFNL VGPIIGLVAT LAPTIGPTVG GYITDLMSWH
WLFFINVVPG IGITIGVLML VDFDEPHYEL LDHFDWWGLL FMAGFLGSLE YVLEEGHRND
WFSDESIFIF AIVCAVCAVG FFWRVLTARE PIVDIRAFTN RNFAFGCLFS FCVGIGLYGL
TYIYPRYLAE VRGYSALMIG ETMFVSGIAM FLSAPLVGRL MTLVDMRILI AIGLLLFAAG
TWLMTGITRD YDFYELLWPQ IFRGVGMMMA MVPVNNIALG TLPPERVKNA SGLFNLTRNL
GGALGLALIN TILDGRTDFH ISRLHDKVNW GNAQAVDFLN MLTQKFQGMG DASLMALKQF
NQIVHRQAVT MSFGDAFFLL TIFYVGLSTL VVLVAKPANP AAAGGGGH
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