| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1960 |
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| Symbol | |
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| ID | 3908040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 2227354 |
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| End bp | 2228682 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637883854 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_485579 |
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| Protein GI | 86749083 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.463219 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGAGC GGCTCGGCAG GTTTCGATTC AGCGGCATCC GCAGCCAGAT CGCGGTGCTG
GTGTTGGCGT CGCTCATCGG GACGCAGTTG CTGATCATGG CGACTTTCCT GCTGCGCGGG
CCGGACCGCT TCGGTCCGCC CGAACATCGG CGCGAGCAGT TCGAAATCGC GGTCCTTCTG
ATCGCGGCGA CTCCCGAGGA GCAGAGGCCG CAGCTCGTCG AACAAATCAC CAGGACATTC
CCTCACCTCG AACTCCGCCT GCTCGACGCC GCCGCGGTGC CGCCGCGGTC CGACCGCGAA
CTGCCGGAAA TTCGCGACGT CGCGCGCACG CTCGGACCAT TGGCGAGGGT GTTCGCGCTG
CCCGGCGCGG AGCCGCCGCA AGTCGGCATT GCGTTGCCGG ACGGGACCGC GATCGCCGCC
GCGATTCCGG AGATGCGAGG CCGGCCTCCG ATCTCGAACG GGCCGTGGAT GAGTGCGTTC
GCCGGCGTGA TCATCAGCCT CGCGATGTTC GGCCTGTGGG CCGACCGGGC GCTGTCGACG
CCGCTGTCGG AATTCGCTGC CGCGGCGGAA AACTTCAAGC TGGACGGCAC CGACGAGCCG
CTGGCCGAGA GCGGGCCGGA CGAAATCCGC TCGCTGGCGC GGGCCATGAA CCGGTCGCGC
AACCGGATCA CGGCGCTGAT CGACGACCGC ACCCGGACAC TGGCTGCGAT CGGCCACGAC
CTGCGCACCC CGATCACGCG GCTGCGGCTG CGCAGCGAAT TCATCGAGGA CGCCACCCAG
CGCGACAACA TGCTGCGCGA TCTCGACCAG ATGCGCTCGA TGCTCGACGC GGTGCTGTCG
TTCCTGCGCA CCGGCCGCGC GCTGGAACCG ATGACGCGGA TCGATCTGGC GAGCACGCTG
CAACTGATCA CCGATCAGTT CACCGATCTG GGCCACAAGG TGACTTATCT GGGGCCTGAA
CATGCCGAAT TGTTGGCGCG GCCGGACGAT ATCCGACGCG CCGTCACCAA TCTGGTCGAC
AACGCAGTTC GCTATGGAAA GGACATCCTG GTCCGGCTGG AAGCGTCGCC CGGGCGCGTC
ACGATCGAGG TCGAAGACGA CGGCCCCGGC ATTCCCGAAG CCTGCAAGGC CGACGTGATC
GAGCCGTTCG TGCGCGGCGA CGATGCGCGC AACATGGACG AGACCTCCGG CTTCGGCCTC
GGCCTCTCGA TCGCCCGGAC CATCGTGCAG AATCACGGCG GCGAACTGAC GCTGCGCGAC
CGCAAGCCGC ACGGCCTGAT CGTGCGGCTC GACCTCCCCG GACAGCAGCA GGACAGCGGC
GCCGCGTGA
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| Protein sequence | MLERLGRFRF SGIRSQIAVL VLASLIGTQL LIMATFLLRG PDRFGPPEHR REQFEIAVLL
IAATPEEQRP QLVEQITRTF PHLELRLLDA AAVPPRSDRE LPEIRDVART LGPLARVFAL
PGAEPPQVGI ALPDGTAIAA AIPEMRGRPP ISNGPWMSAF AGVIISLAMF GLWADRALST
PLSEFAAAAE NFKLDGTDEP LAESGPDEIR SLARAMNRSR NRITALIDDR TRTLAAIGHD
LRTPITRLRL RSEFIEDATQ RDNMLRDLDQ MRSMLDAVLS FLRTGRALEP MTRIDLASTL
QLITDQFTDL GHKVTYLGPE HAELLARPDD IRRAVTNLVD NAVRYGKDIL VRLEASPGRV
TIEVEDDGPG IPEACKADVI EPFVRGDDAR NMDETSGFGL GLSIARTIVQ NHGGELTLRD
RKPHGLIVRL DLPGQQQDSG AA
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