| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1958 |
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| Symbol | |
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| ID | 3908037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 2224451 |
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| End bp | 2225467 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637883852 |
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| Product | glycine oxidase ThiO |
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| Protein accession | YP_485577 |
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| Protein GI | 86749081 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR02352] glycine oxidase ThiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0655991 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGCGGCA CGCCGCCGGA CCTGCGCAAG GACGCGCCGG TCTCGGTGAT CGGCGCCGGC
ATCGCCGGGG CCTGGCAGGC GCTGCTGCTG GCGCGCGCCG GCCGCAACGT CACGCTGTAC
GAGCGCGGCG ACCGCGAAAT GACCCAGGCC ACCAGCCATT GGGCCGGCGG CATGCTGGCG
CCGTATTGCG AGGCCGAGAC CGCCGAACCG ATGGTCGGGC TGATGGGCCT GCGCTCGCTG
GAGATGTGGC GCAAGGAATT CCCCGAGACC GCGTTCAACG GCTCGCTGGT GGTGGCGCAT
GCGCGCGACC GCGCCGATTT CGAGCGCTTC GCCAAGATGA CCGCGGGCCA CAAGCGGCTC
GACGCCGACG GCGTCGCCGA GCTGGAACCG GCGCTGGCCG GCCGCTTCCG CGAGGGCCTG
TACTTCCCCG ACGAGGGCCA TGTCGAGCCG CGGCTGGTGC TGGCGCGGCT GCACGAGCGG
CTGGTCGAGG CCGGCGGCGC GATCCATTTC GAATCGGAGA TGACGCCGGA GGAACTCGAC
GGCCTGGTGA TCGATTGCCG CGGCCTCGCC GCGCGCGACA AGGCGCCGGA ACTGCGCGGC
GTCAAAGGCG AGATGGTGGT GATCAAGACC ACCGAGGTGA CGCTGTCGCG GCCGGTCCGC
TTGATGCATC CGCGCTGGCC GCTCTACGTC ATCCCGCGCG AAGACAATCA CTTCATGCTG
GGCGCCACCT CGATCGAGAG CGAGGACGAA CTCGTCACCG TGCGCTCGGC GCTGGAACTG
CTCAGCGCCG CCTATGCGGT GCATCCGGCG TTCGGCGAGG CGCATATCGT CGAGATCGGC
GCCGGCCTCC GCCCGGCCTT CCCCGACAAT CTGCCGCGCA TTTCCATCGG CAACCGCCGC
ATCGCCACCA ACGGCCTGTA CCGCCACGGC TTCCTGCTGG CGCCGGCGCT GGCCGAGAAG
ATGCTGGCCT ATGTCGAGCG CGGCGTCGTC GACAATCAGG TGATGCGATG CTTGTGA
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| Protein sequence | MRGTPPDLRK DAPVSVIGAG IAGAWQALLL ARAGRNVTLY ERGDREMTQA TSHWAGGMLA
PYCEAETAEP MVGLMGLRSL EMWRKEFPET AFNGSLVVAH ARDRADFERF AKMTAGHKRL
DADGVAELEP ALAGRFREGL YFPDEGHVEP RLVLARLHER LVEAGGAIHF ESEMTPEELD
GLVIDCRGLA ARDKAPELRG VKGEMVVIKT TEVTLSRPVR LMHPRWPLYV IPREDNHFML
GATSIESEDE LVTVRSALEL LSAAYAVHPA FGEAHIVEIG AGLRPAFPDN LPRISIGNRR
IATNGLYRHG FLLAPALAEK MLAYVERGVV DNQVMRCL
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