Gene RPB_1947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1947 
Symbol 
ID3908026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2214683 
End bp2215177 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content65% 
IMG OID637883841 
Producthypothetical protein 
Protein accessionYP_485566 
Protein GI86749070 
COG category[S] Function unknown 
COG ID[COG3779] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.222699 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCTGT GGGTGCTGAT TTCGTTACTT GCCGTTGTCG CCGCGCCGAG TCGGGCGCAG 
TCGCTGATCG ACAAGGCCGC GCGCGACGAG ATCGCCCGCG TCAAGAGCGG CGATCCGGAG
ATGGCCGCGG CGATCGCCAA GGCGCGCGCC GGGCTCGATG GGTTTCTCGC CCGCGCCGAT
CATCCGGCCG GCAATCAGCG CGACTTCGCG GTCAAGGTGA AAGTCCCGCT CGGCGCCAAT
GCGGAGTATC TGTGGCTGCG CCCGTTCGTT CGCGACGGCG ACGGCTTCAT CGGCCGCGTC
GTCAACACGC CGCGCAACAT CGCCAAACTG AAATACGGCG ACCGCCTCGC CTTCGAACGC
AAGGACATCG CAGACTGGTC CTACAAGCAG GACGATCGCG TGATCGGCAA TTTCACCGCC
TGTGTGCTGA TCGCGCGCGA GCCGGCAAAT CAGCGCGCCG CGTTCCGCGA CCAATACGGG
ATCGATTGCG AGTGA
 
Protein sequence
MLLWVLISLL AVVAAPSRAQ SLIDKAARDE IARVKSGDPE MAAAIAKARA GLDGFLARAD 
HPAGNQRDFA VKVKVPLGAN AEYLWLRPFV RDGDGFIGRV VNTPRNIAKL KYGDRLAFER
KDIADWSYKQ DDRVIGNFTA CVLIAREPAN QRAAFRDQYG IDCE