| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1937 |
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| Symbol | |
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| ID | 3908016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 2205910 |
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| End bp | 2206569 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637883831 |
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| Product | triple helix repeat-containing collagen |
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| Protein accession | YP_485556 |
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| Protein GI | 86749060 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.402337 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGGGCGC GTGTGGCCGA TACAGAAGTA ACCCGCCGTG GACGTCCGGG ACCGCAAGGA
CCGCGTGGAC GTCCGGGCGA ACCGGGACGT CCCGGACCGC AGGGACATCC GGGACGGCCG
GGACCGGAAG GCCCGCGCGG CAAGCCGGGG CCGGTCGGCA AACCCGGTCC GCAAGGCAAG
GCCGGCCCGC AGGGCAAGCC CGGCGCCGAC GGCAAACCGG GCCCGCAGGG CCCGCAGGGC
CCGCAAGGCA AGCCCGGCCC CGACGGCAAG GCTGGTCCAG TTGGGCCCGA AGGCAAGCCG
GGACCGCAGG GTCCCCGCGG CGACCAGGGC CCCCGTGGCG AACAGGGACT GCGCGGCGAT
CAGGGCCCGC GCGGCGAGCC CGGCCCTGCC GGCGCCCTCC CCTCGATCGA GCAGGTGATG
CCCTGGCTGC ACCTGATCTT CGACGCCTAT GAGGACTACA AGGCGAAGCG CGAACAGGAG
GCGCGCGAAC GCGCCGAGCG CGAGGCCACG GAGCTGCGCG AAGCGATCGA ACGCGAAGCC
GCCGAGCGCG AGGTCGCAGC TGCGCTCGAC GAGTCGGAGC ACGCCGACGA CGATGAACGC
GACGACGACG ACGAGCGGCC CGACGGCAAG AAAAAGAAGA AGCGCAAGCA CAAGGATTGA
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| Protein sequence | MGARVADTEV TRRGRPGPQG PRGRPGEPGR PGPQGHPGRP GPEGPRGKPG PVGKPGPQGK
AGPQGKPGAD GKPGPQGPQG PQGKPGPDGK AGPVGPEGKP GPQGPRGDQG PRGEQGLRGD
QGPRGEPGPA GALPSIEQVM PWLHLIFDAY EDYKAKREQE ARERAEREAT ELREAIEREA
AEREVAAALD ESEHADDDER DDDDERPDGK KKKKRKHKD
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