| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1928 |
|---|
| Symbol | |
|---|
| ID | 3908007 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 2200345 |
|---|
| End bp | 2201304 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637883822 |
|---|
| Product | phosphonate-binding periplasmic protein |
|---|
| Protein accession | YP_485547 |
|---|
| Protein GI | 86749051 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCCGTT CTGTTCTTCG GACCCTGGCC CTCGGCGCCG CTGTCGGCAT GTCTCTGTCG
AGCAGCGCGT GGGCCCTCGA TCCCCGCTTC ACCGATGCCG ACGGCGACCT GTTGGCCGAC
GTTCCGACCA ACGCGTCGGA GCAGATCGAT CCCCCGGTGC TGGTGTTCGC CTACACGCCC
GTGGAAGACC CCGCCGTTTA CGCCAAGGTC TGGGAAGGCT TCCTGAAGCA TATGGAGCAG
GTCACCGGCA AACGCGTGCA GTTCTTCCCG GTGCAGTCCA ACGCCGCCCA GATCGAGGCG
ATGCGCGCCG GCCGCCTGCA TGTCGCGGGC TTCAACACCG GGTCCAATCC GATCGCGGTG
AACTGCGCCG GCTTCCGCCC GTTCGCGATG ATGGCGTCGA ACAAGGACGA GTTCGGCTAC
AAGATGGAGA TCATCACCTA TCCGGGGTCC GGCATCGAGA AGATCGAGGA CATCAAGGGT
AAGAAGATGG CCTTCACCTC GGAGACTTCG AACTCCGGCT ACAAGGCGCC CTCGGCCCTG
CTGCGCGATC AGTTCAAGAT GGAAGCGCAG AAGGACTACG AGCCGGTGTT CTCCGGCAAG
CACGACAATT CGATTCTCGG CGTCGCCAAC AAGGATTATC CAGCCGCCGC GATCGCCTCC
TCGGTCAAGG ACCGGATGAT CGCGCGCAAC GTAGTGAAGG CCGATCAGTT GAAGGTGATC
TACGCCTCGG CGCCGTTTCC GACCACCGGC TACGGGATGG TCTACAATCT GAAGCCGGAA
CTGCAGGCCA AGATCAAGCA GGCGTTCTTC TCCTACCCGT GGGAAGGCAC CGAACTCCTG
AAGGAGTTCG AGAAGTCCGA TCCGCCGCAG CAGAAGTTCA TGGAGATCTC GTTCAAGGAC
AAGTGGCAGG TGGTGCGTCA GATCGATCAG GCGATGGGCG TCAGCTACGC CTGCAAGTAA
|
|---|
| Protein sequence | MIRSVLRTLA LGAAVGMSLS SSAWALDPRF TDADGDLLAD VPTNASEQID PPVLVFAYTP
VEDPAVYAKV WEGFLKHMEQ VTGKRVQFFP VQSNAAQIEA MRAGRLHVAG FNTGSNPIAV
NCAGFRPFAM MASNKDEFGY KMEIITYPGS GIEKIEDIKG KKMAFTSETS NSGYKAPSAL
LRDQFKMEAQ KDYEPVFSGK HDNSILGVAN KDYPAAAIAS SVKDRMIARN VVKADQLKVI
YASAPFPTTG YGMVYNLKPE LQAKIKQAFF SYPWEGTELL KEFEKSDPPQ QKFMEISFKD
KWQVVRQIDQ AMGVSYACK
|
|---|
| |