| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1926 |
|---|
| Symbol | |
|---|
| ID | 3908005 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 2198602 |
|---|
| End bp | 2199411 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637883820 |
|---|
| Product | phosphonate ABC transporter ATPase |
|---|
| Protein accession | YP_485545 |
|---|
| Protein GI | 86749049 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3639] ABC-type phosphate/phosphonate transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01097] phosphonate ABC transporter, permease protein PhnE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.749096 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCCA TCGCCCGATC ACCGGCGCCG GTCTGGCACC GGCCGCAACT CATCGAGAAC
CGCTGGCTGC GGATCACCGT CGCCGCCGCC GTGCTCGGCT ATCTCTGGCT GGCGCTGTCG
AGCGTCGACG TGGACTGGAC CCGCGTGGTC GAGGGGATGG CGCGCGCCGC GCGGCTGTTC
GCGGGATTCC TGCAGCCAGA CTTCACGTCG CGTTGGAGCG ACATTCAGCA GGGCCTGATC
GAAAGCCTGA CCATGACGGT CTGCGCGACC GTGTTCGGCG TGATCCTGGC GCTGCCGATC
GGGCTCGGCG CCGCGCGCAA CCTGGCGCCG GTGTGGCTCT ACGGCGTCTG CCGCGCGGTG
ATCGCGCTGG CGCGGTCGTT TCAGGAGATC ATCGTCGCGA TTCTTTTCGT CGCGATGTTC
GGCTTCGGCA CCTTCGCGGG CTTTCTGACG CTGTCGCTGT CGACCATCGG CTTCCTGTCG
AAGCTGATCG CCGACGACAT CGAGGAGATC GACCCCGCGC AGGTCGAGGC GATCCGCGCC
ACCGGCGGCG GCTTCTGGCA GGTGATCGAC TACGCGGTCG CCTCGCAGGT GACGCCGCGC
GTGGTCGGCC TCACCGCCTA TCAGGTCGAC ATCAATTTTC GCGAAAGCTC GGTGATCGGC
ATCGTCGGCG CCGGCGGCAT CGGCGCTACG CTCAATACCG CGCTCGATCG CTACGAATTC
GACAGCGCCG CGGCGATCCT CCTGATCATC ATCGCCATCG TGTTGCTGTG CGAATACGCC
TCCGGCTGGA TCCGCAGGAA GGTGGCCTGA
|
|---|
| Protein sequence | MDAIARSPAP VWHRPQLIEN RWLRITVAAA VLGYLWLALS SVDVDWTRVV EGMARAARLF
AGFLQPDFTS RWSDIQQGLI ESLTMTVCAT VFGVILALPI GLGAARNLAP VWLYGVCRAV
IALARSFQEI IVAILFVAMF GFGTFAGFLT LSLSTIGFLS KLIADDIEEI DPAQVEAIRA
TGGGFWQVID YAVASQVTPR VVGLTAYQVD INFRESSVIG IVGAGGIGAT LNTALDRYEF
DSAAAILLII IAIVLLCEYA SGWIRRKVA
|
|---|
| |