Gene RPB_1917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1917 
Symbol 
ID3907996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2190834 
End bp2192054 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content69% 
IMG OID637883811 
ProductErfK/YbiS/YcfS/YnhG 
Protein accessionYP_485536 
Protein GI86749040 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.453265 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAACA ATCGAATCTT GACGTTGTTG GCGACGGTTG CGGCGATCTC GGCCGGAACG 
TCGGTGGTGC ACGCGCAAAA CTATCCGTCT GCGCCCGGAT CCTATGTAAC GCCGGCGCCG
GGCGATTATC GCCAGGAGAT GCCGAATTTT GACAATGTCG ACGACGAGGA TGGCATCGGA
TCCTCTGCGG CGCTGCCGCC GCCGGGTTTG GTGACCTCGC CGGACGATCC GCGCTACGGA
CGTCCCTCGA GCGCGCCGGT CTATTCCGAT CGCGCTCCCG TGCCGCAGGG CCCGGTGATG
TCGCCGGACG ACCCGCGCTA TGGTCGCCCG ATGGGCGCCC CGCCGGTCTA CTCGGAGCGC
GCTCCGGTGC CCCAGGGGCC GGTGATGTCG CCCGATGATC CGCGCTACGG CCGGCCCGCC
GGTCCGCCGT CGGTGATCTA CTCCAATCGC GGCGACGGTT CGCTGCGCCC GCCCGAGGGT
GTTGCCGGCG CCGGACAGCC GGGCGTTCCC CAGGTCGCGA CCGGCTCGGT CCCAGCGGCT
CCGCAGATCG GCGCCGACGG CCGGCCGCTT CAGGTGGCGG CGCTGCCGCC CGAGGAGCAG
CCGGACGCCG ATCAAGAATT CCAGTTGCCG CAACATCTGC GCCGGCAGGA GGTTGCGTTC
CCGACCAAGG AGCCGGCCGG CACCATCGTG GTCGATACCG GCAACACCTA TCTGTATTAC
ATACTCGGCA ACGGCCGCGC CATGCGCTAT GGCGTCCGCG TCGGGCGCGA CGGTTTCACC
TGGAACGGCG TACAGAAAGT CAGCCGCAAG GCGGAGTGGC CGGATTGGCA TCCGCCGACC
GAGATGATCG AGCGCCAGCC CTATCTGCCG CGCTTCATGG CTGGCGGCCC CGGCAATCCG
ATGGGCGCGC GGGCGATGTA TCTCGGCTCG ACGGTGTACC GAATCCACGG CACCAATCAG
CCTTCGACCA TCGGCAAGTT CGTGTCGTCG GGCTGCATCG GCATGCTGAA CGACGACGTC
AGCGACCTGT TCGAGCGCGT CAAGGTCGGC ACCCGCGTCG TCGTGTTGCC GGGCGGCGCG
CCGCCCACGC CGACCGCGAG TGCCCAGTCG CCGCAGCCGG TTGCATCGGC CCAGCCGCCG
CAGCAATCGC TGCAGATGTC CGTTCCCGGA ACGCAGCCGA CATCGGTGGC GCCGCTGCCG
CCCCCCGTGA CGATCCGCTG A
 
Protein sequence
MMNNRILTLL ATVAAISAGT SVVHAQNYPS APGSYVTPAP GDYRQEMPNF DNVDDEDGIG 
SSAALPPPGL VTSPDDPRYG RPSSAPVYSD RAPVPQGPVM SPDDPRYGRP MGAPPVYSER
APVPQGPVMS PDDPRYGRPA GPPSVIYSNR GDGSLRPPEG VAGAGQPGVP QVATGSVPAA
PQIGADGRPL QVAALPPEEQ PDADQEFQLP QHLRRQEVAF PTKEPAGTIV VDTGNTYLYY
ILGNGRAMRY GVRVGRDGFT WNGVQKVSRK AEWPDWHPPT EMIERQPYLP RFMAGGPGNP
MGARAMYLGS TVYRIHGTNQ PSTIGKFVSS GCIGMLNDDV SDLFERVKVG TRVVVLPGGA
PPTPTASAQS PQPVASAQPP QQSLQMSVPG TQPTSVAPLP PPVTIR