Gene RPB_1904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1904 
Symbol 
ID3907983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2177880 
End bp2178494 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content66% 
IMG OID637883798 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_485523 
Protein GI86749027 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.604953 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTGGC TCGAACCGAT CACCCTCAGC GGCCCCCACG CGACGTTGGA GCCGCTTCAG 
CCGGCGCATC GCGACGGGCT GATCGAGGCG GTGCAAGACG GCGAGCTGTG GAAACTTTGG
TACACGGCCG TGCCGTCGCC GGAGAAGATG GACGCCGAGA TCGCCCGGCG GCTGGCGCTG
CAGGCGCAGG GCGCGATGCT GCCCTGGACG GTGAAGGACG CCGACGGCCG GATCGCCGGC
ATGACCACTT ACATGAACGT CGATGCCGCC AACCGCCGGG TCGAGATCGG TTCCACCTGG
TACGCGCGGC GCGTGCAGCG GACCGGGCTG AACACGCAAT GCAAGCTGTT GCTGCTGCAG
CACGCCTTCG AGGCACTCGA CTGCATCGCC GTCGAGTTTC GTACACACTT CTTCAACCAT
CAGTCCCGGC GCGGGATCGA GCGGCTCGGA GCCAAGCAGG ACGGCATTCT GCGCAATCAT
CAGATCGCAT CCAACGGGAC GTTGCGCGAT ACCGTGGTGT ATTCGATCGT CGCCGCCGAA
TGGCCGACCG TGAAGGCTCA TCTTAACTAT CAGCTCTCCG GCAAGCCTCG GCCGGAAGCA
GCAGGCGCCC GTTGA
 
Protein sequence
MPWLEPITLS GPHATLEPLQ PAHRDGLIEA VQDGELWKLW YTAVPSPEKM DAEIARRLAL 
QAQGAMLPWT VKDADGRIAG MTTYMNVDAA NRRVEIGSTW YARRVQRTGL NTQCKLLLLQ
HAFEALDCIA VEFRTHFFNH QSRRGIERLG AKQDGILRNH QIASNGTLRD TVVYSIVAAE
WPTVKAHLNY QLSGKPRPEA AGAR