| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1901 |
|---|
| Symbol | |
|---|
| ID | 3907980 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 2175881 |
|---|
| End bp | 2176162 |
|---|
| Gene Length | 282 bp |
|---|
| Protein Length | 93 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637883795 |
|---|
| Product | excinuclease ABC subunit C |
|---|
| Protein accession | YP_485520 |
|---|
| Protein GI | 86749024 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2827] Predicted endonuclease containing a URI domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.873761 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGACC CAGGCGTCGA AGAGTGCTTC GTCTATGTGC TCGGCTGTGC CGGCCCGAAC
CGCTATCTGA CCTATGTCGG CTGGACGCTC GATCTCGACC GCCGATTGTC GCAGCACAAC
GCCGGCACAG GCGCGCGATC GACCCGCGGC CGACGTTGGG TGCTGATCCA CAGCGAGCGC
TTCACCAGCC GCCGCGAGGC GATGAGCCGC GAATGGCATC TGAAGCGCGA CCGCGCCTTC
CGCCGCAGCC TGGCCGCCAA GGCGCGAGGC CTGAAAGGCT GA
|
|---|
| Protein sequence | MQDPGVEECF VYVLGCAGPN RYLTYVGWTL DLDRRLSQHN AGTGARSTRG RRWVLIHSER
FTSRREAMSR EWHLKRDRAF RRSLAAKARG LKG
|
|---|
| |