Gene RPB_1900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1900 
Symbol 
ID3907979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2174725 
End bp2175381 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content65% 
IMG OID637883794 
Productglutathione S-transferase-like protein 
Protein accessionYP_485519 
Protein GI86749023 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGCGA ACGCCACGCT GACGATCAGC AGCAGGAACT ACTCATCCTG GTCACTGCGA 
GGCTGGCTTC TCACCAAATT CGCAGGGCTC GATTTCGACG AGATCGTCGT TCCGCCGGAT
GACGCCGCGG CGCGGGCCGA GATCCTGCTG TTGTCGTCCT CGATGCTGGT GCCTTGCCTG
CGCCACGACG GCGCGGAGAT CTGGGATACG CTGGCGATTG CGGAGTATCT CAATGAGGTC
AGGCCCGATG CCGGATTGCT GCCGGCGGAG CGGATCGCGC GGGCGCATTG CCGCTCGATC
TGCGGCGAGA TTCATTCCGG CTTCACCACG CTGCGCGCCT CGCTGCCGGT CAATCTGAAG
GGACATTTTC CCGGTTTCAA GATTTGGCCG CGCGCGCAGG CCGATATCGA CCGGGTCTGC
ACCATCTGGC GCGGCTGCCT GAGCCGATCC GGTGGACCGT TCCTGTTCGG CGCGCGGACA
ATGGCGGACG CGATGTACGC GCCGGTGGTG ACGCGGTTCG TCACCTACGA CGTCGCACTC
GAGCCGGCGC TTGGGGCTTA CGCGGGGACG ATCATGGAGA TGCCGGAGAT GCGCGAATGG
ATCGCGGCCG CGCAGCAGGA GCCGGCCGAG ATCGAAGAAC TCGCGGTTTC ACAGTGA
 
Protein sequence
MMANATLTIS SRNYSSWSLR GWLLTKFAGL DFDEIVVPPD DAAARAEILL LSSSMLVPCL 
RHDGAEIWDT LAIAEYLNEV RPDAGLLPAE RIARAHCRSI CGEIHSGFTT LRASLPVNLK
GHFPGFKIWP RAQADIDRVC TIWRGCLSRS GGPFLFGART MADAMYAPVV TRFVTYDVAL
EPALGAYAGT IMEMPEMREW IAAAQQEPAE IEELAVSQ