| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1894 |
|---|
| Symbol | |
|---|
| ID | 3907973 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 2168876 |
|---|
| End bp | 2169865 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637883788 |
|---|
| Product | proline iminopeptidase |
|---|
| Protein accession | YP_485513 |
|---|
| Protein GI | 86749017 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | [TIGR01249] proline iminopeptidase, Neisseria-type subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACCCG ACGCAAAATC CGAGATCCGG TCCGACGACA GCACCAAGGC CGCAGCGCCG
CTCAGCTCTC GAATGCTCGC GGTCGGCGAC GGCCATGAAA TCTATGTCGA AACCAACGGT
AACGCCGACG GTCTTCCCGC GGTCTATCTG CATGGCGGCC CGGGAAGCGG TTGTCAGCCG
GACCACCGGA GGCTGTTCGA TCCGCGGCGG TTTCACGCCG TGCTGTTCGA TCAGCGCGGC
GCCGGCCGCA GCCGGCCGAA AGGCGGGCGT GAGGCGAACA CACTGCCGCA TCTGATCGCC
GATATGGAGT CGATCCGCAC CACGCTCGGG ATCGAACGTT GGCTTGTGGT CGGCGGCTCG
TGGGGGGCGA CGCTGGCGCT GGCCTATACG CAGGCACATC CGCAACGCGT CAGCGGCATC
GTGCTGCGCG CGACCTTCCT CGGTACCCGC GCCGAGCTCG AGGAGGCGTT TCTGTCCACC
CTGCCGCGTT TCTATCCGGA ACTGTCTGCT GATTTTCTGG GCATGCTGCC GGAGGCCGAG
CGCGCGGCGC CGCTCGACGC CTATTGGCGC CGAATCCTCG ATCCAGACCC GGCGGTGCAT
GGCCCCGCGG CGCGGGCCTG GGGCGAAACC GAATCGATCA TGTCGCAGAT CGCACCGAAG
CGACATCGCC TCGAGGTCTT CGACAAGAAC AACAGCCGGC CGATGCCGTC GACACCGTTC
ATGGAAGCGC ACTACTTCGC GCATGACTGC TTCATGCGCC CCGATCAGTT GCTGCAGGGA
GCGCGCGCGC TCGCCGGCAT TCCCGGCATC ATTGTGCAGG GTCGTTACGA TCTGCTGTGC
CCGCCCGCCA CCGCGCATCG GCTGATCGCG GCGTGGCCGG ACGCCGAGCT CCGCATCGTC
GATGCCGCCG GGCATCTTCT GTACGACCCG GGGATTCGCG ACGCGGTGAT CGCCGCGATC
GACGACGTCG CAGGCAGGAT AACAACGTAA
|
|---|
| Protein sequence | MAPDAKSEIR SDDSTKAAAP LSSRMLAVGD GHEIYVETNG NADGLPAVYL HGGPGSGCQP
DHRRLFDPRR FHAVLFDQRG AGRSRPKGGR EANTLPHLIA DMESIRTTLG IERWLVVGGS
WGATLALAYT QAHPQRVSGI VLRATFLGTR AELEEAFLST LPRFYPELSA DFLGMLPEAE
RAAPLDAYWR RILDPDPAVH GPAARAWGET ESIMSQIAPK RHRLEVFDKN NSRPMPSTPF
MEAHYFAHDC FMRPDQLLQG ARALAGIPGI IVQGRYDLLC PPATAHRLIA AWPDAELRIV
DAAGHLLYDP GIRDAVIAAI DDVAGRITT
|
|---|
| |