| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1887 |
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| Symbol | |
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| ID | 3908082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 2160421 |
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| End bp | 2161233 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637883781 |
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| Product | Cof protein |
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| Protein accession | YP_485506 |
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| Protein GI | 86749010 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
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| TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0437079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCA TCGCACTGGT GATCTCCGAT GTCGACGGCA CGCTGCTGAC ATCCGACAAG
CGCCTCACCG ACCAGACCCG CGCCGCGGTG GCGAAGCTGC GGCAGGCCGG CCTCGGCTTC
ACGCTGACGT CGAGCCGGCC GCCGGTCGGG ATGCGGATGT TCAGCGATCC GCTCGGCATC
ACGCTGCCGC TCGGGCCGTT CAACGGCAGT TCGATCGTTG AGCCGTCGCT CGCGGTGATC
GAGCAGCACC TCATTCCCGC GGCGGCGGTG AAGACCAGCC TCGATCTGCT CGAGCGCTAC
GGCATCGACG CCTGGCTCTT CACCAACGAC AATTGGTACA TCCGCCGCGA CGACGGCAAA
TACGTGCCGC ACGAGCAGCG CACCATCCGG TTCGATCCGA CCCGGCTCGA CGACTTCGCG
CCGCTGGCCG ACAAGGCCTG CAAGATCGTC GGCGCCAGTC CGGATTTCGC GCTGGTGGCG
CGCTGCGAAC AGGAATTGCA GGCGGCGCTC GGCGACGCCG CGCTGGCGAT CCGCTCGCAG
GACTACTACC TCGACGTCAC CCCACCCGGT CAGAGCAAGG GCACCTTCGT GCAGGCGATG
GCGAGGCGGC TCGGGATCGC GACGGACGCG ATCGCCACGC TCGGCGACAT GCAGAACGAT
CTGGCGATGT TTCGCGTGTC GGGCCTTCCG ATCGCGATGG GCAACGCCAC CGACGACGTC
AAGCGGCTCG CGTCGCACGT CACCGCCACG AACGACGACG CCGGCTTCGC GGCGGCGATC
GACTTCATCC TCGCCCGCAA CGCGCAGATG TGA
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| Protein sequence | MSRIALVISD VDGTLLTSDK RLTDQTRAAV AKLRQAGLGF TLTSSRPPVG MRMFSDPLGI
TLPLGPFNGS SIVEPSLAVI EQHLIPAAAV KTSLDLLERY GIDAWLFTND NWYIRRDDGK
YVPHEQRTIR FDPTRLDDFA PLADKACKIV GASPDFALVA RCEQELQAAL GDAALAIRSQ
DYYLDVTPPG QSKGTFVQAM ARRLGIATDA IATLGDMQND LAMFRVSGLP IAMGNATDDV
KRLASHVTAT NDDAGFAAAI DFILARNAQM
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