| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1886 |
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| Symbol | |
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| ID | 3908081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2158605 |
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| End bp | 2160410 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637883780 |
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| Product | glycoside hydrolase 15-like protein |
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| Protein accession | YP_485505 |
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| Protein GI | 86749009 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.177282 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCGGGTA GGATCGAAGA CTATGCGCTG ATCGGCGATT GCGAAACCTC GGCACTGGTC
GGTCGCAATG GATCGATCGA CTGGCTGTGC TGGCCGTCGT TCGATTCCGA CGCCTGCTTC
GCAGCTTTAT TGGGCGATGA AAATCACGGC CACTGGCAGA TCGGCCCGTC GCAGGAGCTC
AGGACGACGA CGCGGCGCTA TCGCGGCGAC AGTCTGATCC TCGAGACGCA ATTCGAGACC
GACACCGGAA CCGTCACGCT GATCGATTTC ATGCCGATCC GCGGCAAGGC GTCGGACATC
GTGCGCCTGG TCCGCGGCGA CGCCGGAAAA GTCGAGATGC GCATGCATCT GGTGCTGCGC
TTCGGCTTCG GCGTCAACAT TCCGTGGGTC AAGCGCGGCG AGAAGCCGGG TGAATTGCTG
GCGATCTGCG GTCCGGACAT GACGGTGCTG CGCTCGCCCG TGCGCACCCA CGGCGAAGGC
CTGACGACGG TCGCTGAATT CGTGGTGAGC GAAGGCGACA CGGTGCCGTT CGTGATGACC
TACGGCGCGT CGCACCTGCC GTTGCCCGGC ACGATCGATC CGATCGCCGC ACTGCGCGAC
ACCGAGGAGT TCTGGTCGGA CTGGACCGGC CAATGCACGT ACACCGGCGA GTATCGCGAT
TTGGTGATGC GGTCGCTGAT CACGCTGAAG GCGCTGACCT TCGCGCCCAC CGGCGGCATC
GTCGCGGCGC CGACGACGTC GCTGCCGGAG CAACTGGGCG GCGCGCGCAA TTGGGACTAT
CGGTTCTGCT GGCTGCGCGA TGCGACCTTC ACGCTGTTCG CGCTGATGAA CAACGGCTAC
ACCGCGGAGG CTGCGGCCTG GCACGGCTGG CTGCTGCGCG CAGCCGCCGG CGCGCCGGCC
AAATTGCAGA TCATGTACTC GATCGACGGC CATCGCCGGC TGCTGGAATG GCAGGCCGAC
TGGCTCCCCG GCTACGAGGG GGCGCAGCCG GTGCGGATCG GCAATGCGGC CCACGCGCAA
CTGCAGCTCG ACGTCTACGG CGAGCTGATC GACGCCTTCC ACCAATGGCG GATGGCTGGG
ATCGAACTCG ACGGCGATTC CTGGGCGATG GAATGCGCCG TACTCAAGCA TCTGTCGACG
ATCTGGAGTC AGCCGGACAG CGGCATCTGG GAGCGCCGCG GCCCGGCCAA ACATTACGTC
TTCTCGAAGG TGATGACCTG GGTCGCTTTC GATCGCGGCA TCAAAAGCGC GGAAAAATTC
GGCCTCAAGG CGCCGCTGGC GGCATGGCGC GCGCTGCGCG ACGAGATTCA TCGCGACGTC
TGCGCCAAGG GCTTCGATGC GAAACAGAAT GCCTTCGTCG ATCACTACGG CGCCGACGTG
CTGGACGCCA GCGTGCTGTT GATCCCCGCG GTCGGCTTCC TGCCGCCGGA CGACCCGCGC
GTGCGCGGCA CGGTCGCGGC GATCGAGGCC CACATGATTC ATGATGGATT CGTGCTGCGC
CACGATCCGC GCGAAACCCC CGACGAACCG CTTCCGGTCG AAGGCGCGTT CCTCGCCTGC
AGCCTGTGGC TGGCCGACGC CTATGTGTTC GACGGCAGGA TCGACCAAGC CAAGGTGCTG
TTCGATCGCG TCGTCGGCAT CGCCAACGAC GTCGGCCTTC TCGCCGAGGA ATATGATTCC
GTTGCCGGCC GGCAGACGGG CAATTTCCCG CAGGCGCTCA CTCACATCGC GCTGATCATC
ACCGCCAATA ATCTCAGCGC GGCGAAGGCC GCAACCGGCA AGCCGGCGGT GCAGCGCTCG
AAATAG
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| Protein sequence | MPGRIEDYAL IGDCETSALV GRNGSIDWLC WPSFDSDACF AALLGDENHG HWQIGPSQEL
RTTTRRYRGD SLILETQFET DTGTVTLIDF MPIRGKASDI VRLVRGDAGK VEMRMHLVLR
FGFGVNIPWV KRGEKPGELL AICGPDMTVL RSPVRTHGEG LTTVAEFVVS EGDTVPFVMT
YGASHLPLPG TIDPIAALRD TEEFWSDWTG QCTYTGEYRD LVMRSLITLK ALTFAPTGGI
VAAPTTSLPE QLGGARNWDY RFCWLRDATF TLFALMNNGY TAEAAAWHGW LLRAAAGAPA
KLQIMYSIDG HRRLLEWQAD WLPGYEGAQP VRIGNAAHAQ LQLDVYGELI DAFHQWRMAG
IELDGDSWAM ECAVLKHLST IWSQPDSGIW ERRGPAKHYV FSKVMTWVAF DRGIKSAEKF
GLKAPLAAWR ALRDEIHRDV CAKGFDAKQN AFVDHYGADV LDASVLLIPA VGFLPPDDPR
VRGTVAAIEA HMIHDGFVLR HDPRETPDEP LPVEGAFLAC SLWLADAYVF DGRIDQAKVL
FDRVVGIAND VGLLAEEYDS VAGRQTGNFP QALTHIALII TANNLSAAKA ATGKPAVQRS
K
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