| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1882 |
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| Symbol | |
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| ID | 3908077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 2149038 |
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| End bp | 2151188 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637883776 |
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| Product | glycogen branching enzyme |
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| Protein accession | YP_485501 |
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| Protein GI | 86749005 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.655867 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTCC AATTGACCGA TGACGCCTAT GCGGTGCTCG AAGGCCGCCA CGCGGACCCG
TTTCGCTATC TCGGCCCGCA TCCCGAGGAC GACCGCGTCG TCGTCCGGGC GCTGTTGCCG
GATGCGACCG CGGTCGAGGC GGTCGGCGAG CATGGCGAGA CGGCCATCCT CGAGCGGGTT
CACGATGCCG GTCTGTTCGC CGGGCCGCTG CCGAACGGCT CACATCGCTA TCAGCTCCGC
GCCCGGTTCG GCGACACTAC CGTGGATCTC GAAGATCCGT ATCGCTTTCC CCCGATCCTG
ACCGAGTTCG ATCTGTATCT GCTGGGCGAA GGCACCGATC AGCGGCTGTA CGACAAGCTC
GGCGCGCACC CGATGGTGCT GGAAGGCGTC AGAGGCGTCG GCTTCGTGGT GCTGGCGCCC
AATGCCCGCC GCGTCAGCGT GGTCGGCGAC TTCAACTTCT GGAATCCGCG CCGGCACCAG
ATGCGGGTGC GCGGCAACGG CTATTGGGAG CTGTTCATCC CCGGCGCCAC CGCCGGCGAT
CACTACAAAT TCGACATGAC CGGGCCGAAC GGCGAGACGC TGCCGCAAAA GTCCGATCCG
ATGGCGTTCG CCGCCGAGAT GCGGCCGAAG ACGGCCTCGA TCGTGGTGGA TCAGACCCGG
CTGCCGCTGC CACGCCCGGC GCCGGACAAC ATCAACGCGC TCGGCGCGCC GATGTCGATC
TACGAGGTGC ATCTGGGCTC GTGGCGCCGC AAGGACGGCG AGCAGTGGCT GACCTATCGC
GAGCTCGCCG AGCAATTGCC GGCCTATGTC CGCGACATGG GCTTCACCCA TGTCGAATTT
TTGCCGGTCA GCGAGCATCC GTTCGACGGC TCCTGGGGCT ATCAGCCGAC CGGGCTGTTT
GCGCCGACCA GCCGGTTCGG CACGCCGGAG GATTTCTGCG CGCTGATCGA CGCCTGCCAT
GAGCACGGCA TCGGCGTGCT GCTCGACTGG GTCCCCGGCC ACTTCCCCGA CGATCCGCAC
GGGCTCGGCA ATTTCGACGG CACCGCGCTG TACGAGCACG CCAACCCGCT GCAGGGCCGG
CATCTGGACT GGGGCACGCT GATCTACAAT TACGGCCGCA CCGAAGTGGT GAACTTCCTG
GTGTCGAACG CGCTGTTCTG GCTGGAACGC TACCGCATCG ACGGGTTGCG GGTCGATGCG
GTGGCCTCGA TGCTGTATCT CGACTACAGC CGGCCGGCGG GCGGCTGGAT CCCGAACAAG
TTCGGCGGCC GCGAGAACAT CGAGGCGATC GACTTCCTGC GCCGCTTCAA CGCCGAGGTC
TACGCCAAAT TCCCGCAGGC CACCACGGCA GCCGAGGAAT CCACCGCCTG GCCGCAGGTG
TCGCGCCCGG TCGAGTTCGG CGGGCTCGGC TTCGGCTACA AGTGGAACAT GGGCTGGATG
CACGACACGC TGAACTACAT CAGCAAGGAT CCGATCCACC GCAAATATCA CCACGGCCAG
ATCCTGTTCG GGCTGCACTA CGCATTCTCG GAGAACTTCA TCCTGCCGCT GTCGCACGAC
GAGGTCGTGC ACGGCAAACG CTCGATCCTC GGCCGGATGC CGGGCGACGA ATGGCAGCGC
TTCGCCAATC TGCGCGCCTA CTACGCCTTC ATGTTCGCGC ATCCGGGCAA GAAGCTGATG
TTCATGGGCA GCGAATTCGG CCAGGAGCGG GAGTGGAATC ACGATCGCTC ACTCGACTGG
CACCTGCTCG ACACCCCGAA ATACGCCGGC ATCCAGGCGC TGGTCCGCGA CCTCAACAGA
CTGTACCGGG ACTTGCCGGC GCTGCATCAG CTCGATTGCG ATCCGTTCGG CTTCGAATGG
ATCATCACCG AAGACGCCGC GCGCAACGTG TTCGCCTGGA TGCGGAAGGG CAACGACACC
CGGGCGCGCT GCCTGGTGAT CGTGAATTTC TCCCCGAACG TCTATCAGGA CTACCGCGTC
CGTGTGCCCT TCCCCGGCCG CTGGCGCGAG GTGCTGAATT CCGACGCCGC GATTTACGGC
GGCAGCAATG TCGGCAACGC CGGCGAGGTT CGGACTCTCG AGGGATTGGT GCCCGAGCTC
AGTCTGAACA TTCCGCCGCT GGCCGCGATC TTTCTGAAGC CGGAAGATTG A
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| Protein sequence | MTVQLTDDAY AVLEGRHADP FRYLGPHPED DRVVVRALLP DATAVEAVGE HGETAILERV
HDAGLFAGPL PNGSHRYQLR ARFGDTTVDL EDPYRFPPIL TEFDLYLLGE GTDQRLYDKL
GAHPMVLEGV RGVGFVVLAP NARRVSVVGD FNFWNPRRHQ MRVRGNGYWE LFIPGATAGD
HYKFDMTGPN GETLPQKSDP MAFAAEMRPK TASIVVDQTR LPLPRPAPDN INALGAPMSI
YEVHLGSWRR KDGEQWLTYR ELAEQLPAYV RDMGFTHVEF LPVSEHPFDG SWGYQPTGLF
APTSRFGTPE DFCALIDACH EHGIGVLLDW VPGHFPDDPH GLGNFDGTAL YEHANPLQGR
HLDWGTLIYN YGRTEVVNFL VSNALFWLER YRIDGLRVDA VASMLYLDYS RPAGGWIPNK
FGGRENIEAI DFLRRFNAEV YAKFPQATTA AEESTAWPQV SRPVEFGGLG FGYKWNMGWM
HDTLNYISKD PIHRKYHHGQ ILFGLHYAFS ENFILPLSHD EVVHGKRSIL GRMPGDEWQR
FANLRAYYAF MFAHPGKKLM FMGSEFGQER EWNHDRSLDW HLLDTPKYAG IQALVRDLNR
LYRDLPALHQ LDCDPFGFEW IITEDAARNV FAWMRKGNDT RARCLVIVNF SPNVYQDYRV
RVPFPGRWRE VLNSDAAIYG GSNVGNAGEV RTLEGLVPEL SLNIPPLAAI FLKPED
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