| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1879 |
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| Symbol | |
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| ID | 3908074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 2142414 |
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| End bp | 2145200 |
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| Gene Length | 2787 bp |
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| Protein Length | 928 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637883773 |
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| Product | malto-oligosyltrehalose synthase |
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| Protein accession | YP_485498 |
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| Protein GI | 86749002 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3280] Maltooligosyl trehalose synthase |
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| TIGRFAM ID | [TIGR02401] malto-oligosyltrehalose synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCCCG CGATCCCGAC TGCGACTTAC CGTATCCAGC TCACCGCCGC TTTCGGCTTC
GACGATGCGG CCGCGATCGT GCCGTATCTC AAGGCGCTCG GGATTTCGCA TCTCTACGCG
TCGCCCTTCA CCAAGGCGCG CCGCGGATCG ACCCACGGCT ACGACATCGT CGATCACACC
ACGCTCAACC CCGAACTCGG CGGCGAAGAG GCGTTCGCGC GACTGTCCGC GGCGCTGAAG
AGCCACGATA TCGGCCTGAT CCTCGACTTC GTCCCCAACC ATGTCGGCGT TCACTTCGCC
GACAATCCAT GGTGGCTGGA CGTTCTGGAA TGGGGCCCGG CATCGCCGCA TGCCGCCTCG
TTCGACATCG ACTGGGAGAT GCTGCCGTTC CGCAACCGCG GCGGGGTGTT GCTGCCGATC
ATCGGAACCT CCTACGGCAA GGCGCTGGAG AGCGGCGAGA TCGGGCTACG CTACGACGCC
GGCGACGGCA GTTTCTCGGC TTGGTACTTC GAACACCGGT TGCCGATCGC GCCGCAGCGC
TACAGCGAGA TCCTGCGTAC GATCGTACGC GAGGCCGATG CCACCGATCA TCCCGCCGGC
AAGGCGATCC TCGCGCTCGC CGCGCGCTAT CGCGGATTGC GCCACCCGGA TCGCAAGGAA
GCGCCGGACT TCAAGGCGGC GCTGAAGGCT GTTCCGGGCA GCGCCGACCT GATCGACAAG
GGCCTCGCCG CCTATCGGGC CGGCGAAGGC CGCAATACGC AGATTCAGGC GCTGCACAAT
CTGCTCGAAC GCCAGCACTA CAAGCTCGGC CATTGGCAAC TCGCCGCGAG CGAGATCAAC
TATCGCCGCT TCTTCGACGT CAACACCCTC GCCGGCTTGC GCGTCGAGGA CGCCGGCACG
TTCGAGGGGA TCCACACGCT GGTGAAGCGG CTGATCGCCA ACGGTCAGCT ACAGGGCCTG
CGGCTCGACC ACATCGACGG CCTGCGCGAC CCTGCGCAAT ATTTCCAGCG CCTGCGCCGG
CTCACCCGCG AGGCGCAGGG GCCTGCCGCG CCGCCGCTCT ACATGGTGAT CGAGAAGATC
CTCGGCGACG GCGAGCCGTT GCGGCGCTTC GCCGGTGTCC ACGGCACCAC CGGCTACGAA
TGGCTGAATG TCATCACCCA GGCGCTGGTC GACGGCGCAG GCCTGCAGCC GCTCGACGAG
GTCTGGCGGC AGGTGAGCAA CACCTCGCCG GATTTTCCGC CGGTGCTGAT GCGCGCCAAG
CGCCGCGTGC TGGAGACGCT GCTGCTCAGC GAATTCACCG TGCTGACGCG GCTGCTGGCC
CGGATCGCCA GCGGGCACTA TTCGACGCGC GATTTCTCCG CCGACAATCT GCGGCAGGTG
TTCGAACTCT ACGTGCTGCA CTTCCCGGTG TATCGCACCT ATATCAGCGG GTCCGGCCCG
AACGGACCCG ATCGCGAACT GATCGCCCAG ACCATCGAGA AGGCGCGCGC CGACTGGTTC
GGCGCGGACG ACGGCATTTT CGACTTCCTG CAGGACGCGC TGACGATGGA CCTGCTGAAG
GGCCGGGCCG CGCACAGCAA GCCGCGGGTG CGCCGCTTCG CGCTCAAGGT CCAGCAATTC
ACCGGGCCGA CCATGGCGAA GTCGCTAGAG GACACCGCCT TCTATCGCTA CCATCGCCTG
CTCGCGCTCA ACGAGGTCGG CGGCGAACCC GCCGCGCACG CGCTGGCGCC GGATGCCTTC
CATCAGCTGA TGACGCAGCG GGCGCAGGAC TGGCCGCACG GCATGACCGC GACCATGACC
CACGACGCCA AGCGCGGCGA AGACGCGCGG ACGCGGCTGC TGGCGCTGGC GGAGATGCCG
GGCGAATGGG CCAGCCTGGT CGCCAAATGG AAGCTGCTGA ACGCGGCCCA TCTGGTGACG
GACGGCGCGA TGCGGGCCCC GTCGGCGACG TTCGAATACA TGCTGTATCA GGGCCTGCTC
GGCGCCTGGC CGCTCGAACC CGACGCCGAC TTCACCGACC GGATTCAGGG CTACGCGCTG
AAGGCCGCGC GCGAAGGCAA AGAAGAGACC AACTGGATCA ACCCGAACCT CGCTTATGAG
GAAGGCATCC GCATCTTCGT CGACCGCATT CTCGACCCCG CCCAGTCCGG CGCGTTCCTC
GACTCGCTGC AGCGCGCGTC CGAGCGCGTC TCCGTGATCG GCGCGCTGAA TTCGCTGAGC
CAGGTCACGC TGAAGACGAT GATGCCCGGC GTCCCTGATT TGTATCAGGG CACGGAGTTC
TGGGACTTCT CTCTGGTCGA TCCCGACAAT CGCCGCCCGG TCGATTTTGC CGCCCGCGAA
AAGGCGCTCG CAGCGCTTGC CGAGCCGGAC TGGGACGCGC TGCTGCGCAA CTGGAGCGAC
GGCCGCGTCA AGCTGGCCTG GACCCGGCAG TTGCTCGCGA TCCGCAACGA ACTCCGCAGC
GTGTTCACCG ACGGGGATTA TCGGCCGCTC GCGATCTCGG GTCCGCATCG CGACCATGCG
ATCGCTTTCG CCCGCACCCG CGGCGCTCAG GCCGTGATCG TGGTAGTTGG AAAGAACTTC
GCACCGCTGT CGGACAACGG CCGGCGATGG CCGCGCGGCG ACGCGTTCGA CGCCACAGTG
GATGTTTCCG GATTCACCGT CGAAGGCACG ACCGGAAGCG ACGTGAAGCT CTCCGAGCTG
TTTCGCAATC TGCCGGTCGC GGTCCGTCAG GCGCGCCTGA GCAATCTCGC CGGCCCGGCT
CGGCCACGCC GAAAGACAAG CGCCTGA
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| Protein sequence | MPPAIPTATY RIQLTAAFGF DDAAAIVPYL KALGISHLYA SPFTKARRGS THGYDIVDHT
TLNPELGGEE AFARLSAALK SHDIGLILDF VPNHVGVHFA DNPWWLDVLE WGPASPHAAS
FDIDWEMLPF RNRGGVLLPI IGTSYGKALE SGEIGLRYDA GDGSFSAWYF EHRLPIAPQR
YSEILRTIVR EADATDHPAG KAILALAARY RGLRHPDRKE APDFKAALKA VPGSADLIDK
GLAAYRAGEG RNTQIQALHN LLERQHYKLG HWQLAASEIN YRRFFDVNTL AGLRVEDAGT
FEGIHTLVKR LIANGQLQGL RLDHIDGLRD PAQYFQRLRR LTREAQGPAA PPLYMVIEKI
LGDGEPLRRF AGVHGTTGYE WLNVITQALV DGAGLQPLDE VWRQVSNTSP DFPPVLMRAK
RRVLETLLLS EFTVLTRLLA RIASGHYSTR DFSADNLRQV FELYVLHFPV YRTYISGSGP
NGPDRELIAQ TIEKARADWF GADDGIFDFL QDALTMDLLK GRAAHSKPRV RRFALKVQQF
TGPTMAKSLE DTAFYRYHRL LALNEVGGEP AAHALAPDAF HQLMTQRAQD WPHGMTATMT
HDAKRGEDAR TRLLALAEMP GEWASLVAKW KLLNAAHLVT DGAMRAPSAT FEYMLYQGLL
GAWPLEPDAD FTDRIQGYAL KAAREGKEET NWINPNLAYE EGIRIFVDRI LDPAQSGAFL
DSLQRASERV SVIGALNSLS QVTLKTMMPG VPDLYQGTEF WDFSLVDPDN RRPVDFAARE
KALAALAEPD WDALLRNWSD GRVKLAWTRQ LLAIRNELRS VFTDGDYRPL AISGPHRDHA
IAFARTRGAQ AVIVVVGKNF APLSDNGRRW PRGDAFDATV DVSGFTVEGT TGSDVKLSEL
FRNLPVAVRQ ARLSNLAGPA RPRRKTSA
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