Gene RPB_1864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1864 
Symbol 
ID3908059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2128999 
End bp2129904 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content66% 
IMG OID637883758 
ProductAlpha/beta hydrolase 
Protein accessionYP_485483 
Protein GI86748987 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.541932 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00668375 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCGATC TCGCCGACTT GTTTCCGGGC TTCGGCTCGG AATGGATCAA CACCTCGTCC 
GGCCGCATCT TCGCGCGCAC CGGCGGTGAC GGGCCGCCGC TGCTGCTGCT GCACGGCTTT
TCCGAAACCC ATGTGATGTG GCACCGCGTC GCGCCGCTTC TCGCCGAGCG CTTCAAGCTG
ATCATCGCCG ATCTGCCCGG CTATGGCTGG TCCGACATGC CGGAGAGCGA TGCCGAGCAC
ACGCCCTACA CCAAGCGGGC GATGGCCGCG CAACTGATCG AGGCGATGGA GCAACTCGGC
CATGTGCACT TCGCGCTCGC CGGCCACGAC CGCGGCGGCC GCGTCAGCTA TCGGCTGGCG
CTCGATCATC CCGGCCGGCT GTCGAAGCTG GCGGTGCTCG ATATCCTGCC GACCTACGAG
TACTGGATGC GGATGGACCG CGCCTATGCG CTGAAGATCT ATCACTGGAG CTTCCTCGCG
CAGCCCGCAC CGCTGCCGGA AACGCTGATC GGCGCCAGTT CGGATTTCTA TCTGAAGAAC
AAGCTCGCGA GCTGGGCCAA GAAGAAGGAT CTGTCCTGCT TCGATCCGCG CGCGATGGAG
CACTATCTCG CGCCGTTCCG CGATCCGATG CGGCTGCACG CGATGTGCGA GGATTATCGC
GCCGGTGCCA ACGCCGACTT CGCGCACGAC AAGGCCGACC ATGATGCCGG CAAGAAAATC
CCGGTGCCGA TGCTGGCGCT GTGGGGCGAT GCCGGCATCG CCCAGTCCGC GGCGACGCCG
CTCGACACCT GGCGGAACTG GGCGAAGGAC GTGCAAGGCG GCCCAGTCGA TTCCGGCCAT
TTCCTCACCG AGGAGGCGCC GGAGCAGACG GCGCAGGCGC TGCTCGATTT CTTCACGGCA
GGCTAG
 
Protein sequence
MPDLADLFPG FGSEWINTSS GRIFARTGGD GPPLLLLHGF SETHVMWHRV APLLAERFKL 
IIADLPGYGW SDMPESDAEH TPYTKRAMAA QLIEAMEQLG HVHFALAGHD RGGRVSYRLA
LDHPGRLSKL AVLDILPTYE YWMRMDRAYA LKIYHWSFLA QPAPLPETLI GASSDFYLKN
KLASWAKKKD LSCFDPRAME HYLAPFRDPM RLHAMCEDYR AGANADFAHD KADHDAGKKI
PVPMLALWGD AGIAQSAATP LDTWRNWAKD VQGGPVDSGH FLTEEAPEQT AQALLDFFTA
G