Gene RPB_1853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1853 
Symbol 
ID3908048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2119099 
End bp2119860 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content66% 
IMG OID637883747 
Productinositol-1(or 4)-monophosphatase 
Protein accessionYP_485472 
Protein GI86748976 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0483] Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0604801 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000548461 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCTGCTGG CCGAGACGGT CCGGGACGCC GGTGGCTTGG CGCTGTCGAT GTTCCGCACC 
GAGCTGCGCG AGTGGACCAA GGGCGCTTCG TCGCCGGTGT CCGAGGCCGA TATCGCCGTC
AACGATCTGA TCCGGGATCG ACTGCAAACC GCCGTTCCCG ATTACGGCTG GCTGTCGGAG
GAGAGCGCCG ACGATCCCGC ACGGCTGGAC AGGCGGCGGG TGTGGATCAT CGACCCGATC
GACGGCACCC GCGCCTATCT GGCCGGACGC GAGGACTGGT GCGTCTCCGC CGCATTGGTC
GAGGATGCCC AGCCGATTCT CGCGGCGGTT TTCGCGCCGG TCAGCAACGA ATTCTTCTTC
GCGGCCCGCG GCGGCGGCGC AACCCTGAAC GGCGTGCCGA TTCGCGCGAG CCGCGGCGTG
GAACTGGATT GCGTCAAAGT CGCGGGACCC AAGCCGCTGA TCGAGCGGCT GTCGCTGCCG
GCAGGCGCTC ACATTCTTCC GCGGATCGGC TCGCTGGCAT TGCGATTATG TGGCGTCGCC
GATCGCCGGA TCGACATTGC GTTCGCAGGT GGGCAAAGCC GCGACTGGGA CCTTGCAGCG
GCCGATTTGA TCGTGCACGA AGCGGATGGT ACACTAACAA CCCTCGCGGG CGAGCCCATC
GTCTACAACC GTCCCGAGGT CACGCACGGC GTGCTGTTGG CCGCGGGGCG CGATCGTCAT
GCTCGCATCG TCGAGCATTT TCGCAATCGT CCTGTGAATT GA
 
Protein sequence
MLLAETVRDA GGLALSMFRT ELREWTKGAS SPVSEADIAV NDLIRDRLQT AVPDYGWLSE 
ESADDPARLD RRRVWIIDPI DGTRAYLAGR EDWCVSAALV EDAQPILAAV FAPVSNEFFF
AARGGGATLN GVPIRASRGV ELDCVKVAGP KPLIERLSLP AGAHILPRIG SLALRLCGVA
DRRIDIAFAG GQSRDWDLAA ADLIVHEADG TLTTLAGEPI VYNRPEVTHG VLLAAGRDRH
ARIVEHFRNR PVN