| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1852 |
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| Symbol | |
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| ID | 3908047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2117661 |
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| End bp | 2119058 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637883746 |
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| Product | peptidase U62, modulator of DNA gyrase |
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| Protein accession | YP_485471 |
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| Protein GI | 86748975 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.405759 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000697877 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGAACTCTT CACCAAGCAT TCGATCGCCG TCGTCGCCTT CCAAGGATCA GGACCTGTTC
GATCAGTCGG CGTTGAGCGA ACTGGCGCAG CGGCTGGTCG AGGCGGCGTT GCGCGCCGGC
GCCGATCAGG CCGACGCGGT CGCGGTGCGC GGCGTCTCGC ACGGCGTCGA ACTACGCGAT
GGACGGATGC AGGAATCCGA GCGCTCCGAG GGCGACGATG TCGGCCTGCG CGTGCTGGTC
GGCCGCCGCC AGGCGGTGGT CTCGACCAAC GATATCACCG GCGACGGCGT CTCGAAACTG
GCCGAGCGCG CGGTGGCGAT GGCCCGGGTC GCGCCCGACG ACAAATATGT CGGCCTCGCC
GATCCCGCGC TGCTCGCCCG CGATTTTCCC GATCTCGACA TGCTCGATCC GCAGACGCCC
TCGACCGCCG AGCTGGAGCG TCGCGCGCGC GAAGCCGAAG CCGCGGCGCT GGTGGTGAAG
GGTGTCACCA AATCGGGCGG CGCCTCGGCA TCGGCGGGCA TCGGCGGCAT GGTGCTGGTG
ACCTCGACCG GCTTCCACGG CGCCTTCTTG CGCTCCAGCC AGAGCGTCTC GATGACCGCG
ATCGCCGGCG ACGGCACCGG CATGGAGCGC GACTACGAAT ACACCACGGC GCCGCACGCC
GCGGATCTGA TGTCGCCGGA GACCGTCGGC CGCGTCGCCG GCGAGCGCAC CGCGGCGCGC
GTCGGCCCGC GCAAGGTCGA GACCTGCAAG GTGCCGGTGA TCTTCGATCC GCGCGTCGCC
GGCTCGCTGG TCGGGCATCT GGTCGGCGCG GTCAATGGCG CCGCGATCGC GCGCAAGACC
TCGTTCCTGA AGGATCGGCT CGGCGACAAG CTGTTTCGCG ACGGCATCCG CATCGTCGAC
GATCCGCTGC GCAAGCGCGG GCTGCGCTCG CAGGCGTTCG ACGCCGAGGG CGTCGCGGTG
AAAGAGCTTG CGATCGTCGA TGACGGCGTG CTGACCAGCT GGCTGCTCGA CTGCGCCACC
GCGCGCGAAC TCGGGCTCAC CACCACCGGC CACGCGCATC GCGGCGTGTC GTCGTCGCCG
TCGCCCGGGC CCTACAATCT GCATCTCGAA GGCGGCACGA TGAGCCGGGC CGAGCTGATG
AGCGACATCA AGCAGGGTTT CTACGTCACC GACCTGATCG GCTCCGGCGT CAACGGCGTC
ACCGGCGACT ACAGCCGCGG CGCCGCCGGG TTCTGGATCG AGAACGGCGA GTGCACCTAC
GCGGTCAGCG AGGTCACCAT CGCCGGCCAT CTGATCGAGA TGTACAAGAC GCTGACGCCG
GCCAATGATC TGACCTTCCG GTATGGCGTC AACGCGCCGA CGCTGCGGAT CGAGGGGCTG
ACGATTGCCG GACGCTAG
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| Protein sequence | MNSSPSIRSP SSPSKDQDLF DQSALSELAQ RLVEAALRAG ADQADAVAVR GVSHGVELRD
GRMQESERSE GDDVGLRVLV GRRQAVVSTN DITGDGVSKL AERAVAMARV APDDKYVGLA
DPALLARDFP DLDMLDPQTP STAELERRAR EAEAAALVVK GVTKSGGASA SAGIGGMVLV
TSTGFHGAFL RSSQSVSMTA IAGDGTGMER DYEYTTAPHA ADLMSPETVG RVAGERTAAR
VGPRKVETCK VPVIFDPRVA GSLVGHLVGA VNGAAIARKT SFLKDRLGDK LFRDGIRIVD
DPLRKRGLRS QAFDAEGVAV KELAIVDDGV LTSWLLDCAT ARELGLTTTG HAHRGVSSSP
SPGPYNLHLE GGTMSRAELM SDIKQGFYVT DLIGSGVNGV TGDYSRGAAG FWIENGECTY
AVSEVTIAGH LIEMYKTLTP ANDLTFRYGV NAPTLRIEGL TIAGR
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