Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1844 |
Symbol | |
ID | 3909003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 2110159 |
End bp | 2111202 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637883738 |
Product | glycosyl transferase family protein |
Protein accession | YP_485463 |
Protein GI | 86748967 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000858357 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAGACTGG GGAACGACCT GTCAGGCCTG AATGCCGGTG CGAGTTCCGT CGCGCTGGGA CTGTCGATCG TCGTTCCGGC GTTCAACGAG GCCGCCGGAT TGCCGGCGCT GCACGACCGG CTCACGACGC TCGCGGCCAC GCTGCGGCAG CGCTATGGGC TCGCCTGCGA GGTCGTCTAT GTCGACGACG GCAGCGCCGA TGCGACGTTG AGCATCGCCC GCGATCTTCC CGCCGTCGGC ATCGACGTGC AGGTGGTGTC GCTGTCGCGC AATTTCGGCA AGGAAGCCGC CCTGCTCGCC GGCCTCGATC ATGCCCGCCG CGGCGCCGTG CTGTTCATGG ACGGCGACGG CCAGCACGCG CCGGAGCTGG TCGAGACGCT GGTGTCGCAC TGGATCGACG ACGGCTACGA CGTCGTCTAC ACCGCCAAGG CGCATCGCGA CAACGAGCCG GCGCTGCGCC GCGCCGCGGT ACGCGGCTTC TACGCGATGA TCAATTGGGG CGCGCGGCAG AAGATCCCGG AAGACGCCGG CGATTTCCGC CTGCTGTCGC CGCGCGCGGC GACCGCATTG AAGCTGCTCC CCGAGCGCAA CCGCTTCTTC AAGGGGCTGG CGAGCTGGAT CGGCTTCAAG CAGTTCCGGG TCGACTACGA GCCGGCGCCG CGCACCCACG GCTTCACCAG CTTCAGCGCC GGCCGGCTGA TCGGCCTGTC GATCGAAGGC CTGACCTCGT TCTCGGTGGC GCCGCTGCGG ATCGCCAGTC TGCTCGGCGC GGCATTGGCG TTCGGCGCCT TCCTGTTCGG ACTGTCGATC CTGTGGGAGA CCTGGGTCGG CGGCAAGTCG GTGCCCGGCT ATCCATCGCT GATGGTCGGC ATGATGACGA TCGGCGGCGT GCAATTACTG ATGATCGGCA TCGTCGGCGA ATACATCGGC AAGATCCTGT CCGAGCTGAA GGCGCGGCCG ATCTACTTCG TCGCCGAGCA CAGCGTCCGG CAATCCGACC CGAGCGCCGA CGCCGGCCCG GCCAAGCAGA CCGCCGCCGA ATGA
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Protein sequence | MRLGNDLSGL NAGASSVALG LSIVVPAFNE AAGLPALHDR LTTLAATLRQ RYGLACEVVY VDDGSADATL SIARDLPAVG IDVQVVSLSR NFGKEAALLA GLDHARRGAV LFMDGDGQHA PELVETLVSH WIDDGYDVVY TAKAHRDNEP ALRRAAVRGF YAMINWGARQ KIPEDAGDFR LLSPRAATAL KLLPERNRFF KGLASWIGFK QFRVDYEPAP RTHGFTSFSA GRLIGLSIEG LTSFSVAPLR IASLLGAALA FGAFLFGLSI LWETWVGGKS VPGYPSLMVG MMTIGGVQLL MIGIVGEYIG KILSELKARP IYFVAEHSVR QSDPSADAGP AKQTAAE
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