Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1843 |
Symbol | |
ID | 3909002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 2109287 |
End bp | 2110162 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637883737 |
Product | YdjC-like protein |
Protein accession | YP_485462 |
Protein GI | 86748966 |
COG category | [S] Function unknown |
COG ID | [COG3394] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000761949 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAGCGCCG TGGCGCCGCG GCGGATCTGG CTGTGCGCCG ACGATTACGG CCTCAGCCCC GGCGTCAACC GCGCCATCCT CGACCTGATC GAGCGCCGCC GCATCAACGC CACCTCGGTG ATGATGGTGG GGCCCGCGAT CGGCCGCGCC GACGTCCGCG CGCTGCTGGA TGCGACCACG GCCAATCCCG ATTGCGCCAT CGGCCTGCAT GCGACGCTGA CCGCGCCGTT CTCGCCGCTG ACGATGCACT ACCACCCGCT GCATGGCGGC ATCTTCCTGC CGCTCGGCCG CAAGCTGCGC GGCACCTTGT TGCGCCGGCA CGACCGGCAC GTCATCGCCG CCGAATTGAC GGCGCAGCTC GAAGCCTTCG CCGAACGCTT CGGGCGGATG CCGGACTACG TCGACGGCCA CCAGCACGTG CAGCTGTTTC CGCAGGTCCG CGACGCCTTC GTCGGCGTGG TTCAGGCGCT GGCGCCGCAC GCCTGGGTCC GGCAATGCGG CCGGGCGCAG CCGCTGGCGC AGCGGCTCGG CGCGCCGAAA CCATTGCTGC TCGATGTGCT GAGCGCCCCG TTCCGCAAAC GCGCGGCGCA AGCCGGCCTC GCCTTCAATC CGGGTTTTGC CGGCGCCTAT GATTTCTCCC GCGAGACCGA CTTCGAGAAA CTCCTGACCT CGTTTCTCGA CGGCCTGCCG GACGGCGGGC TGGTGATGTG TCACCCCGGC TTCGTCGATG ATGTGCTGAT CAGCCTCGAT CCGTTCACCG ATCAGCGCGA GCGCGAACAC GCCTTTCTCG CCGGCGACCG CTTCCTGCCG CTGCTGGCGG AGCACAATGT GACGCTGGCG CGACCGGCCG CCTCGCCCTC TCCTACCGAA AATTAA
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Protein sequence | MSAVAPRRIW LCADDYGLSP GVNRAILDLI ERRRINATSV MMVGPAIGRA DVRALLDATT ANPDCAIGLH ATLTAPFSPL TMHYHPLHGG IFLPLGRKLR GTLLRRHDRH VIAAELTAQL EAFAERFGRM PDYVDGHQHV QLFPQVRDAF VGVVQALAPH AWVRQCGRAQ PLAQRLGAPK PLLLDVLSAP FRKRAAQAGL AFNPGFAGAY DFSRETDFEK LLTSFLDGLP DGGLVMCHPG FVDDVLISLD PFTDQREREH AFLAGDRFLP LLAEHNVTLA RPAASPSPTE N
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